Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC8P31273 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC8P31273 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.34□□□□□ -1.55
HOXC8P31273 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC8P31273 AC136624.4-201ENST00000573044 370 ntBASIC5.34□□□□□ -1.55
HOXC8P31273 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXC8P31273 AP005119.2-201ENST00000579735 1105 ntBASIC5.34□□□□□ -1.55
HOXC8P31273 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC8P31273 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.34□□□□□ -1.55
HOXC8P31273 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.34□□□□□ -1.55
HOXC8P31273 AC034236.3-201ENST00000605999 461 ntBASIC5.34□□□□□ -1.55
HOXC8P31273 AC005972.3-201ENST00000606304 481 ntBASIC5.34□□□□□ -1.55
HOXC8P31273 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC8P31273 AC106730.3-201ENST00000624568 641 ntBASIC5.34□□□□□ -1.55
HOXC8P31273 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC8P31273 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC8P31273 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC8P31273 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
HOXC8P31273 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC8P31273 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC8P31273 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC8P31273 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC8P31273 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HOXC8P31273 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HOXC8P31273 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HOXC8P31273 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
HOXC8P31273 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
HOXC8P31273 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HOXC8P31273 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HOXC8P31273 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
HOXC8P31273 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HOXC8P31273 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC8P31273 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC8P31273 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC8P31273 SPATA2P1-201ENST00000431223 2055 ntBASIC5.33□□□□□ -1.56
HOXC8P31273 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC8P31273 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC8P31273 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC8P31273 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC8P31273 HSPA8P17-201ENST00000427029 1382 ntBASIC5.33□□□□□ -1.56
HOXC8P31273 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC8P31273 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HOXC8P31273 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HOXC8P31273 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC8P31273 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC8P31273 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC8P31273 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC8P31273 RPL26P37-201ENST00000411983 438 ntBASIC5.33□□□□□ -1.56
HOXC8P31273 ATG4AP1-201ENST00000416893 538 ntBASIC5.33□□□□□ -1.56
HOXC8P31273 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC8P31273 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC8P31273 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.33□□□□□ -1.56
HOXC8P31273 AC245517.2-201ENST00000442890 346 ntBASIC5.33□□□□□ -1.56
HOXC8P31273 TPT1P12-201ENST00000448968 492 ntBASIC5.33□□□□□ -1.56
HOXC8P31273 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC8P31273 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC8P31273 AL672167.3-201ENST00000465951 960 ntBASIC5.33□□□□□ -1.56
HOXC8P31273 AC092905.1-201ENST00000467527 949 ntBASIC5.33□□□□□ -1.56
HOXC8P31273 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC8P31273 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC8P31273 RPS27AP18-201ENST00000515536 459 ntBASIC5.33□□□□□ -1.56
HOXC8P31273 RNU2-30P-201ENST00000516209 141 ntBASIC5.33□□□□□ -1.56
HOXC8P31273 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC8P31273 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC8P31273 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC8P31273 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC8P31273 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC8P31273 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC8P31273 PRPF19P1-201ENST00000584766 898 ntBASIC5.33□□□□□ -1.56
HOXC8P31273 AC006363.1-201ENST00000603806 463 ntBASIC5.33□□□□□ -1.56
HOXC8P31273 AC012557.1-201ENST00000607115 611 ntBASIC5.33□□□□□ -1.56
HOXC8P31273 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC8P31273 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC8P31273 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
HOXC8P31273 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXC8P31273 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC8P31273 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC8P31273 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC8P31273 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXC8P31273 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC8P31273 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC8P31273 RNU4-39P-201ENST00000362455 127 ntBASIC5.32□□□□□ -1.56
HOXC8P31273 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC8P31273 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HOXC8P31273 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC8P31273 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC8P31273 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXC8P31273 AC004690.1-201ENST00000418216 328 ntBASIC5.32□□□□□ -1.56
HOXC8P31273 QRSL1P2-201ENST00000418582 964 ntBASIC5.32□□□□□ -1.56
HOXC8P31273 VTI1BP4-201ENST00000427516 527 ntBASIC5.32□□□□□ -1.56
HOXC8P31273 OR52E3P-201ENST00000452083 936 ntBASIC5.32□□□□□ -1.56
HOXC8P31273 FTH1P2-201ENST00000466086 412 ntBASIC5.32□□□□□ -1.56
HOXC8P31273 RPS23P7-201ENST00000466210 444 ntBASIC5.32□□□□□ -1.56
HOXC8P31273 AC037198.2-201ENST00000478845 733 ntBASIC5.32□□□□□ -1.56
HOXC8P31273 RN7SL558P-201ENST00000497468 299 ntBASIC5.32□□□□□ -1.56
HOXC8P31273 Y_RNA.719-201ENST00000517156 106 ntBASIC5.32□□□□□ -1.56
HOXC8P31273 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXC8P31273 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.32□□□□□ -1.56
HOXC8P31273 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXC8P31273 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms