Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 OR1F12-201ENST00000402365 945 ntBASIC5.87□□□□□ -1.47
TM4SF1P30408 AL389915.1-201ENST00000422463 466 ntBASIC5.87□□□□□ -1.47
TM4SF1P30408 MRPS33P4-201ENST00000434892 317 ntBASIC5.87□□□□□ -1.47
TM4SF1P30408 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.87□□□□□ -1.47
TM4SF1P30408 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.87□□□□□ -1.47
TM4SF1P30408 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TM4SF1P30408 AC089999.1-201ENST00000460336 374 ntBASIC5.87□□□□□ -1.47
TM4SF1P30408 RPS27AP16-201ENST00000492222 470 ntBASIC5.87□□□□□ -1.47
TM4SF1P30408 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.87□□□□□ -1.47
TM4SF1P30408 AC020593.1-201ENST00000507399 299 ntBASIC5.87□□□□□ -1.47
TM4SF1P30408 MTND2P31-201ENST00000512602 616 ntBASIC5.87□□□□□ -1.47
TM4SF1P30408 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.87□□□□□ -1.47
TM4SF1P30408 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.87□□□□□ -1.47
TM4SF1P30408 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.87□□□□□ -1.47
TM4SF1P30408 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.87□□□□□ -1.47
TM4SF1P30408 AC092868.3-201ENST00000560515 784 ntBASIC5.87□□□□□ -1.47
TM4SF1P30408 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.87□□□□□ -1.47
TM4SF1P30408 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.87□□□□□ -1.47
TM4SF1P30408 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.87□□□□□ -1.47
TM4SF1P30408 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.87□□□□□ -1.47
TM4SF1P30408 AC015802.5-201ENST00000607478 399 ntBASIC5.87□□□□□ -1.47
TM4SF1P30408 AC008785.1-201ENST00000624475 456 ntBASIC5.87□□□□□ -1.47
TM4SF1P30408 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.87□□□□□ -1.47
TM4SF1P30408 AC022417.1-201ENST00000624768 1303 ntBASIC5.87□□□□□ -1.47
TM4SF1P30408 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.87□□□□□ -1.47
TM4SF1P30408 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TM4SF1P30408 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.87□□□□□ -1.47
TM4SF1P30408 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TM4SF1P30408 AL138820.1-201ENST00000617901 5305 ntBASIC5.87□□□□□ -1.47
TM4SF1P30408 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.87□□□□□ -1.47
TM4SF1P30408 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TM4SF1P30408 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TM4SF1P30408 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
TM4SF1P30408 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TM4SF1P30408 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
TM4SF1P30408 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TM4SF1P30408 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
TM4SF1P30408 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TM4SF1P30408 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.86□□□□□ -1.47
TM4SF1P30408 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.86□□□□□ -1.47
TM4SF1P30408 NCOA4P2-201ENST00000340589 1813 ntBASIC5.86□□□□□ -1.47
TM4SF1P30408 SOCS5P3-201ENST00000425115 1576 ntBASIC5.86□□□□□ -1.47
TM4SF1P30408 RNU6-1263P-201ENST00000384601 106 ntBASIC5.86□□□□□ -1.47
TM4SF1P30408 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TM4SF1P30408 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.86□□□□□ -1.47
TM4SF1P30408 AL606490.7-201ENST00000433136 191 ntBASIC5.86□□□□□ -1.47
TM4SF1P30408 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.86□□□□□ -1.47
TM4SF1P30408 OR52E3P-201ENST00000452083 936 ntBASIC5.86□□□□□ -1.47
TM4SF1P30408 AC091544.1-201ENST00000484702 348 ntBASIC5.86□□□□□ -1.47
TM4SF1P30408 RN7SL810P-201ENST00000493031 276 ntBASIC5.86□□□□□ -1.47
TM4SF1P30408 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.86□□□□□ -1.47
TM4SF1P30408 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.86□□□□□ -1.47
TM4SF1P30408 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.86□□□□□ -1.47
TM4SF1P30408 MTND2P7-201ENST00000521337 640 ntBASIC5.86□□□□□ -1.47
TM4SF1P30408 PRPF19P1-201ENST00000584766 898 ntBASIC5.86□□□□□ -1.47
TM4SF1P30408 MIMT1-201ENST00000597105 1050 ntBASIC5.86□□□□□ -1.47
TM4SF1P30408 ARF4P1-201ENST00000605447 541 ntBASIC5.86□□□□□ -1.47
TM4SF1P30408 AC007620.3-201ENST00000608131 497 ntBASIC5.86□□□□□ -1.47
TM4SF1P30408 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.86□□□□□ -1.47
TM4SF1P30408 BX005214.3-202ENST00000619809 325 ntBASIC5.86□□□□□ -1.47
TM4SF1P30408 AL163152.1-201ENST00000642001 374 ntBASIC5.86□□□□□ -1.47
TM4SF1P30408 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TM4SF1P30408 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
TM4SF1P30408 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
TM4SF1P30408 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TM4SF1P30408 STX3-208ENST00000641815 3236 ntBASIC5.86□□□□□ -1.47
TM4SF1P30408 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TM4SF1P30408 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.85□□□□□ -1.47
TM4SF1P30408 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
TM4SF1P30408 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.85□□□□□ -1.47
TM4SF1P30408 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.85□□□□□ -1.47
TM4SF1P30408 AC017079.1-201ENST00000333650 415 ntBASIC5.85□□□□□ -1.47
TM4SF1P30408 TMSB10P2-201ENST00000416049 131 ntBASIC5.85□□□□□ -1.47
TM4SF1P30408 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TM4SF1P30408 TMBIM7P-201ENST00000418074 855 ntBASIC5.85□□□□□ -1.47
TM4SF1P30408 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.85□□□□□ -1.47
TM4SF1P30408 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.85□□□□□ -1.47
TM4SF1P30408 MTND4LP13-201ENST00000425022 298 ntBASIC5.85□□□□□ -1.47
TM4SF1P30408 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.85□□□□□ -1.47
TM4SF1P30408 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.85□□□□□ -1.47
TM4SF1P30408 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.85□□□□□ -1.47
TM4SF1P30408 VN1R48P-201ENST00000448149 1036 ntBASIC5.85□□□□□ -1.47
TM4SF1P30408 SCARNA10-201ENST00000459255 330 ntBASIC5.85□□□□□ -1.47
TM4SF1P30408 RN7SL604P-201ENST00000492589 296 ntBASIC5.85□□□□□ -1.47
TM4SF1P30408 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.85□□□□□ -1.47
TM4SF1P30408 FABP5P6-201ENST00000510588 409 ntBASIC5.85□□□□□ -1.47
TM4SF1P30408 IGLVIV-65-201ENST00000517313 360 ntBASIC5.85□□□□□ -1.47
TM4SF1P30408 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.85□□□□□ -1.47
TM4SF1P30408 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.85□□□□□ -1.47
TM4SF1P30408 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.85□□□□□ -1.47
TM4SF1P30408 MRPL49P2-201ENST00000521066 465 ntBASIC5.85□□□□□ -1.47
TM4SF1P30408 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.85□□□□□ -1.47
TM4SF1P30408 GLRXP2-201ENST00000555594 321 ntBASIC5.85□□□□□ -1.47
TM4SF1P30408 PSMB7P1-201ENST00000556349 514 ntBASIC5.85□□□□□ -1.47
TM4SF1P30408 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.85□□□□□ -1.47
TM4SF1P30408 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.85□□□□□ -1.47
TM4SF1P30408 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.85□□□□□ -1.47
TM4SF1P30408 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.85□□□□□ -1.47
TM4SF1P30408 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.85□□□□□ -1.47
TM4SF1P30408 AL583832.1-201ENST00000603227 784 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms