Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RAB5AP20339 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
RAB5AP20339 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.71□□□□□ -1.82
RAB5AP20339 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RAB5AP20339 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
RAB5AP20339 AC105074.1-201ENST00000623380 3095 ntBASIC3.71□□□□□ -1.82
RAB5AP20339 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
RAB5AP20339 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.71□□□□□ -1.82
RAB5AP20339 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.7□□□□□ -1.82
RAB5AP20339 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.7□□□□□ -1.82
RAB5AP20339 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
RAB5AP20339 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RAB5AP20339 RNA5SP22-201ENST00000365393 109 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RAB5AP20339 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RAB5AP20339 SNORA16A-201ENST00000384342 137 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
RAB5AP20339 RN7SKP240-201ENST00000410583 375 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 RN7SKP167-201ENST00000411047 285 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 GJA6P-201ENST00000415117 1042 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 TRGV6-201ENST00000417928 299 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 AL035660.1-201ENST00000422041 222 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 AL139158.1-201ENST00000424719 340 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 AC009965.2-201ENST00000425328 970 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 AC234779.1-201ENST00000425910 285 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 AC073069.1-201ENST00000428657 441 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC3.7□□□□□ -1.82
RAB5AP20339 GAPDHP59-201ENST00000435908 267 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 MTCYBP12-201ENST00000440559 1134 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 AL606490.8-201ENST00000441624 319 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC3.7□□□□□ -1.82
RAB5AP20339 GAPDHP25-201ENST00000447061 1001 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.7□□□□□ -1.82
RAB5AP20339 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RAB5AP20339 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.7□□□□□ -1.82
RAB5AP20339 AC068228.1-201ENST00000461723 211 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC3.7□□□□□ -1.82
RAB5AP20339 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC3.7□□□□□ -1.82
RAB5AP20339 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3.7□□□□□ -1.82
RAB5AP20339 AC011037.1-201ENST00000483964 558 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 RPS27AP16-201ENST00000492222 470 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.7□□□□□ -1.82
RAB5AP20339 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
RAB5AP20339 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.7□□□□□ -1.82
RAB5AP20339 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC3.7□□□□□ -1.82
RAB5AP20339 RNU6-615P-201ENST00000516065 106 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 Y_RNA.719-201ENST00000517156 106 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.7□□□□□ -1.82
RAB5AP20339 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
RAB5AP20339 AP000648.1-201ENST00000529682 397 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 UBTFL9-201ENST00000534504 1148 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 AC092851.1-201ENST00000535964 478 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.7□□□□□ -1.82
RAB5AP20339 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RAB5AP20339 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC3.7□□□□□ -1.82
RAB5AP20339 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC3.7□□□□□ -1.82
RAB5AP20339 AL360157.1-201ENST00000565962 87 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.7□□□□□ -1.82
RAB5AP20339 AC015912.2-201ENST00000571053 181 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.7□□□□□ -1.82
RAB5AP20339 MIR4502-201ENST00000580432 81 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC3.7□□□□□ -1.82
RAB5AP20339 HMGB2P1-201ENST00000591146 634 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
RAB5AP20339 BNIP3P7-201ENST00000605641 516 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 AL031666.3-201ENST00000609320 1006 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 MIR6736-201ENST00000616799 59 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 AL591926.8-201ENST00000616876 211 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 AC139769.3-201ENST00000618383 175 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 AC006453.5-201ENST00000636451 619 ntBASIC3.7□□□□□ -1.82
RAB5AP20339 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
RAB5AP20339 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RAB5AP20339 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.7□□□□□ -1.82
RAB5AP20339 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RAB5AP20339 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RAB5AP20339 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.7□□□□□ -1.82
RAB5AP20339 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
RAB5AP20339 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RAB5AP20339 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC3.69□□□□□ -1.82
RAB5AP20339 COX6B1P3-201ENST00000312310 260 ntBASIC3.69□□□□□ -1.82
RAB5AP20339 RNA5SP90-201ENST00000364801 99 ntBASIC3.69□□□□□ -1.82
RAB5AP20339 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RAB5AP20339 MIR105-1-201ENST00000385222 81 ntBASIC3.69□□□□□ -1.82
RAB5AP20339 OR7E101P-201ENST00000400428 513 ntBASIC3.69□□□□□ -1.82
RAB5AP20339 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.69□□□□□ -1.82
RAB5AP20339 RNA5SP345-201ENST00000410646 108 ntBASIC3.69□□□□□ -1.82
RAB5AP20339 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC3.69□□□□□ -1.82
RAB5AP20339 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.69□□□□□ -1.82
RAB5AP20339 CENPIP1-201ENST00000425713 902 ntBASIC3.69□□□□□ -1.82
RAB5AP20339 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC3.69□□□□□ -1.82
RAB5AP20339 RPL7P4-203ENST00000430239 730 ntBASIC3.69□□□□□ -1.82
RAB5AP20339 RPS29P14-201ENST00000431518 171 ntBASIC3.69□□□□□ -1.82
RAB5AP20339 NDUFS5P5-201ENST00000437256 321 ntBASIC3.69□□□□□ -1.82
RAB5AP20339 PPIAP17-201ENST00000438507 471 ntBASIC3.69□□□□□ -1.82
RAB5AP20339 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.69□□□□□ -1.82
RAB5AP20339 AP000281.1-201ENST00000444036 316 ntBASIC3.69□□□□□ -1.82
RAB5AP20339 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.69□□□□□ -1.82
RAB5AP20339 AC005297.1-201ENST00000444765 862 ntBASIC3.69□□□□□ -1.82
RAB5AP20339 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms