Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.75□□□□□ -1.33
NFKB1P19838 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.75□□□□□ -1.33
NFKB1P19838 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.75□□□□□ -1.33
NFKB1P19838 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.75□□□□□ -1.33
NFKB1P19838 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.75□□□□□ -1.33
NFKB1P19838 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC6.75□□□□□ -1.33
NFKB1P19838 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.75□□□□□ -1.33
NFKB1P19838 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.75□□□□□ -1.33
NFKB1P19838 OR7E19P-202ENST00000589942 844 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC6.75□□□□□ -1.33
NFKB1P19838 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.75□□□□□ -1.33
NFKB1P19838 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.75□□□□□ -1.33
NFKB1P19838 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC6.75□□□□□ -1.33
NFKB1P19838 COX6CP4-201ENST00000605798 228 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 AC004241.2-201ENST00000614562 444 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 AC006504.8-201ENST00000621046 635 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC6.75□□□□□ -1.33
NFKB1P19838 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.75□□□□□ -1.33
NFKB1P19838 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
NFKB1P19838 AC112243.1-201ENST00000623949 3851 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 LCOR-201ENST00000286067 4542 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.75□□□□□ -1.33
NFKB1P19838 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NFKB1P19838 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
NFKB1P19838 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NFKB1P19838 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
NFKB1P19838 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.75□□□□□ -1.33
NFKB1P19838 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NFKB1P19838 AL512353.3-201ENST00000417517 1326 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
NFKB1P19838 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NFKB1P19838 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.74□□□□□ -1.33
NFKB1P19838 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NFKB1P19838 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
NFKB1P19838 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
NFKB1P19838 AC021242.1-201ENST00000507315 2035 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NFKB1P19838 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NFKB1P19838 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
NFKB1P19838 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NFKB1P19838 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC6.74□□□□□ -1.33
NFKB1P19838 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
NFKB1P19838 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NFKB1P19838 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NFKB1P19838 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NFKB1P19838 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
NFKB1P19838 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
NFKB1P19838 AC139426.3-201ENST00000605648 2059 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
NFKB1P19838 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NFKB1P19838 RNA5SP321-201ENST00000362722 111 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 RNU1-46P-201ENST00000384425 164 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
NFKB1P19838 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
NFKB1P19838 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.74□□□□□ -1.33
NFKB1P19838 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.74□□□□□ -1.33
NFKB1P19838 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.74□□□□□ -1.33
NFKB1P19838 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.74□□□□□ -1.33
NFKB1P19838 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC6.74□□□□□ -1.33
NFKB1P19838 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.74□□□□□ -1.33
NFKB1P19838 SNRPEP10-201ENST00000420249 274 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC6.74□□□□□ -1.33
NFKB1P19838 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC6.74□□□□□ -1.33
NFKB1P19838 DPY19L1P2-201ENST00000426647 915 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.74□□□□□ -1.33
NFKB1P19838 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6.74□□□□□ -1.33
NFKB1P19838 AC002486.1-201ENST00000435098 391 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 TAAR7P-201ENST00000436141 242 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 AC083855.1-201ENST00000440041 258 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 AL512605.1-202ENST00000441919 381 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.74□□□□□ -1.33
NFKB1P19838 AC093166.3-201ENST00000448785 303 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 AL121578.2-201ENST00000448797 447 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.74□□□□□ -1.33
NFKB1P19838 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.74□□□□□ -1.33
NFKB1P19838 AC096576.1-201ENST00000489014 359 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 RPL35P6-201ENST00000490024 372 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC6.74□□□□□ -1.33
NFKB1P19838 AC111193.1-201ENST00000504097 155 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.74□□□□□ -1.33
NFKB1P19838 RNU6-1281P-201ENST00000516223 105 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.74□□□□□ -1.33
NFKB1P19838 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NFKB1P19838 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.74□□□□□ -1.33
NFKB1P19838 AC007424.1-203ENST00000554613 687 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 PSMA3P-201ENST00000555485 635 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 AL121821.2-201ENST00000556081 394 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 TRAV15-201ENST00000556680 249 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.74□□□□□ -1.33
NFKB1P19838 RPS4XP21-201ENST00000603814 750 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 AL513218.1-201ENST00000606527 391 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 AC093388.1-201ENST00000609166 430 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 Z95327.3-201ENST00000610385 572 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 AC234782.5-201ENST00000617723 324 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 AC116563.2-201ENST00000624751 535 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
NFKB1P19838 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms