Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
FREM3P0C091 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.1□□□□□ -1.75
FREM3P0C091 SNORD96B-201ENST00000386148 79 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FREM3P0C091 RPL21P43-201ENST00000425440 472 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 NPM1P26-201ENST00000426339 738 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 VDAC1P6-201ENST00000430062 855 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 RPL7P32-201ENST00000457119 744 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 RPL23AP24-201ENST00000458203 385 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
FREM3P0C091 RNA5SP73-201ENST00000516744 108 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 AC034205.1-201ENST00000520621 638 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.1□□□□□ -1.75
FREM3P0C091 FKBP1BP1-201ENST00000553366 325 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.1□□□□□ -1.75
FREM3P0C091 BPIFA4P-203ENST00000603168 689 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 AL591034.3-201ENST00000605511 685 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 AC100847.1-201ENST00000611316 481 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.1□□□□□ -1.75
FREM3P0C091 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
FREM3P0C091 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FREM3P0C091 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FREM3P0C091 UGT2B26P-201ENST00000508672 1613 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
FREM3P0C091 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.1□□□□□ -1.75
FREM3P0C091 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FREM3P0C091 AC021146.4-201ENST00000309229 279 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 RPL23AP59-201ENST00000399415 461 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.1□□□□□ -1.75
FREM3P0C091 TMSB10P2-201ENST00000416049 131 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 AL356387.2-201ENST00000422272 243 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.1□□□□□ -1.75
FREM3P0C091 RPEP3-201ENST00000425462 676 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 FHP1-201ENST00000442741 703 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.1□□□□□ -1.75
FREM3P0C091 AC009220.1-201ENST00000451614 275 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
FREM3P0C091 AC083829.1-201ENST00000503756 657 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 AK4P6-201ENST00000505168 528 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 RN7SKP46-201ENST00000515942 234 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 AC097505.1-201ENST00000610199 565 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.1□□□□□ -1.75
FREM3P0C091 AC009120.7-201ENST00000623452 780 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
FREM3P0C091 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
FREM3P0C091 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FREM3P0C091 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.1□□□□□ -1.75
FREM3P0C091 AC125336.1-201ENST00000508893 2827 ntBASIC4.1□□□□□ -1.75
FREM3P0C091 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FREM3P0C091 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
FREM3P0C091 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
FREM3P0C091 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
FREM3P0C091 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
FREM3P0C091 AC097374.1-203ENST00000400783 485 ntBASIC4.09□□□□□ -1.75
FREM3P0C091 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.09□□□□□ -1.75
FREM3P0C091 AC234779.1-201ENST00000425910 285 ntBASIC4.09□□□□□ -1.75
FREM3P0C091 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.09□□□□□ -1.75
FREM3P0C091 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.09□□□□□ -1.75
FREM3P0C091 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.09□□□□□ -1.75
FREM3P0C091 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.09□□□□□ -1.75
FREM3P0C091 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
FREM3P0C091 AC108475.1-201ENST00000507880 950 ntBASIC4.09□□□□□ -1.75
FREM3P0C091 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.09□□□□□ -1.75
FREM3P0C091 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.09□□□□□ -1.75
FREM3P0C091 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.09□□□□□ -1.75
FREM3P0C091 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.09□□□□□ -1.75
FREM3P0C091 OR7A19P-201ENST00000608051 733 ntBASIC4.09□□□□□ -1.75
FREM3P0C091 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
FREM3P0C091 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
FREM3P0C091 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.09□□□□□ -1.75
FREM3P0C091 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
FREM3P0C091 AL603750.1-201ENST00000624216 1717 ntBASIC4.09□□□□□ -1.75
FREM3P0C091 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.09□□□□□ -1.75
FREM3P0C091 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.09□□□□□ -1.75
FREM3P0C091 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
FREM3P0C091 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
FREM3P0C091 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
FREM3P0C091 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
FREM3P0C091 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
FREM3P0C091 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.09□□□□□ -1.76
FREM3P0C091 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
FREM3P0C091 RNU1-20P-201ENST00000363314 162 ntBASIC4.09□□□□□ -1.76
FREM3P0C091 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
FREM3P0C091 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
FREM3P0C091 AC011933.1-201ENST00000413334 321 ntBASIC4.09□□□□□ -1.76
FREM3P0C091 AC117434.1-201ENST00000419971 836 ntBASIC4.09□□□□□ -1.76
FREM3P0C091 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.09□□□□□ -1.76
FREM3P0C091 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.09□□□□□ -1.76
FREM3P0C091 AC116533.1-201ENST00000459748 321 ntBASIC4.09□□□□□ -1.76
FREM3P0C091 AC090142.1-201ENST00000465776 462 ntBASIC4.09□□□□□ -1.76
FREM3P0C091 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.09□□□□□ -1.76
FREM3P0C091 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.09□□□□□ -1.76
FREM3P0C091 OR5M7P-201ENST00000526140 972 ntBASIC4.09□□□□□ -1.76
FREM3P0C091 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.09□□□□□ -1.76
FREM3P0C091 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.09□□□□□ -1.76
FREM3P0C091 AC009704.2-201ENST00000618739 483 ntBASIC4.09□□□□□ -1.76
FREM3P0C091 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.09□□□□□ -1.76
FREM3P0C091 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
FREM3P0C091 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms