Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 AK4P6-201ENST00000505168 528 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 AC025857.1-201ENST00000525252 377 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 AC008033.2-201ENST00000542626 177 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 MIR4646-201ENST00000580775 63 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 AC020910.3-201ENST00000603701 874 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 AP001521.2-201ENST00000608772 546 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 AC073575.2-201ENST00000614212 627 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 AC112694.2-201ENST00000623697 768 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 THAP12P8-201ENST00000447914 2115 ntBASIC4.16□□□□□ -1.74
HLA-DPB1P04440 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DPB1P04440 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DPB1P04440 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DPB1P04440 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DPB1P04440 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.15□□□□□ -1.74
HLA-DPB1P04440 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.15□□□□□ -1.74
HLA-DPB1P04440 ZFRP1-201ENST00000457579 2970 ntBASIC4.15□□□□□ -1.74
HLA-DPB1P04440 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.15□□□□□ -1.74
HLA-DPB1P04440 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 MIR448-201ENST00000362131 111 ntBASIC4.15□□□□□ -1.75
HLA-DPB1P04440 RN7SKP115-201ENST00000363177 317 ntBASIC4.15□□□□□ -1.75
HLA-DPB1P04440 RNA5SP22-201ENST00000365393 109 ntBASIC4.15□□□□□ -1.75
HLA-DPB1P04440 AL590762.2-201ENST00000395798 571 ntBASIC4.15□□□□□ -1.75
HLA-DPB1P04440 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 AL645733.1-201ENST00000402250 217 ntBASIC4.15□□□□□ -1.75
HLA-DPB1P04440 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 AC098592.2-201ENST00000413158 265 ntBASIC4.15□□□□□ -1.75
HLA-DPB1P04440 AC096644.3-201ENST00000416788 338 ntBASIC4.15□□□□□ -1.75
HLA-DPB1P04440 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 AC010733.1-201ENST00000451515 401 ntBASIC4.15□□□□□ -1.75
HLA-DPB1P04440 RPL7P61-201ENST00000451721 751 ntBASIC4.15□□□□□ -1.75
HLA-DPB1P04440 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 AGGF1P3-201ENST00000493675 1213 ntBASIC4.15□□□□□ -1.75
HLA-DPB1P04440 AC008897.1-201ENST00000494006 347 ntBASIC4.15□□□□□ -1.75
HLA-DPB1P04440 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 AC025164.1-201ENST00000496249 478 ntBASIC4.15□□□□□ -1.75
HLA-DPB1P04440 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 RFPL4AP5-201ENST00000514977 504 ntBASIC4.15□□□□□ -1.75
HLA-DPB1P04440 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 AC021006.3-201ENST00000530771 192 ntBASIC4.15□□□□□ -1.75
HLA-DPB1P04440 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 AC051619.2-201ENST00000559063 397 ntBASIC4.15□□□□□ -1.75
HLA-DPB1P04440 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 AL159169.2-201ENST00000610061 1269 ntBASIC4.15□□□□□ -1.75
HLA-DPB1P04440 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 AC131971.1-201ENST00000332881 1482 ntBASIC4.15□□□□□ -1.75
HLA-DPB1P04440 AL031119.1-201ENST00000404707 1879 ntBASIC4.15□□□□□ -1.75
HLA-DPB1P04440 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DPB1P04440 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 HMGB3P7-201ENST00000400214 611 ntBASIC4.14□□□□□ -1.75
HLA-DPB1P04440 UBTFL3-201ENST00000418934 1024 ntBASIC4.14□□□□□ -1.75
HLA-DPB1P04440 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 CENPIP1-201ENST00000425713 902 ntBASIC4.14□□□□□ -1.75
HLA-DPB1P04440 SKP1P3-201ENST00000429280 487 ntBASIC4.14□□□□□ -1.75
HLA-DPB1P04440 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 RPL23AP25-201ENST00000430973 463 ntBASIC4.14□□□□□ -1.75
HLA-DPB1P04440 PA2G4P6-201ENST00000438325 1197 ntBASIC4.14□□□□□ -1.75
HLA-DPB1P04440 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 AC069285.2-201ENST00000440210 275 ntBASIC4.14□□□□□ -1.75
HLA-DPB1P04440 SNRPFP2-201ENST00000440710 251 ntBASIC4.14□□□□□ -1.75
HLA-DPB1P04440 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 RN7SL329P-201ENST00000467740 299 ntBASIC4.14□□□□□ -1.75
HLA-DPB1P04440 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.14□□□□□ -1.75
HLA-DPB1P04440 UBTFL6-201ENST00000477929 1024 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms