Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC073264.2-201ENST00000448886 166 ntBASIC4.89□□□□□ -1.63
APOEP02649 AC090142.1-201ENST00000465776 462 ntBASIC4.89□□□□□ -1.63
APOEP02649 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.89□□□□□ -1.63
APOEP02649 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
APOEP02649 AC007686.1-201ENST00000488511 463 ntBASIC4.89□□□□□ -1.63
APOEP02649 IGLV2-34-201ENST00000490007 283 ntBASIC4.89□□□□□ -1.63
APOEP02649 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
APOEP02649 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.89□□□□□ -1.63
APOEP02649 CDH12P4-201ENST00000517835 295 ntBASIC4.89□□□□□ -1.63
APOEP02649 CDH12P3-201ENST00000517935 295 ntBASIC4.89□□□□□ -1.63
APOEP02649 CDH12P1-201ENST00000518435 295 ntBASIC4.89□□□□□ -1.63
APOEP02649 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
APOEP02649 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.89□□□□□ -1.63
APOEP02649 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
APOEP02649 FKBP1BP1-201ENST00000553366 325 ntBASIC4.89□□□□□ -1.63
APOEP02649 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.89□□□□□ -1.63
APOEP02649 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.89□□□□□ -1.63
APOEP02649 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
APOEP02649 AC006971.1-201ENST00000407916 4486 ntBASIC4.89□□□□□ -1.63
APOEP02649 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.89□□□□□ -1.63
APOEP02649 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
APOEP02649 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.89□□□□□ -1.63
APOEP02649 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.89□□□□□ -1.63
APOEP02649 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
APOEP02649 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.88□□□□□ -1.63
APOEP02649 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.88□□□□□ -1.63
APOEP02649 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
APOEP02649 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
APOEP02649 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
APOEP02649 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
APOEP02649 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
APOEP02649 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
APOEP02649 MTHFD2P5-201ENST00000320415 844 ntBASIC4.88□□□□□ -1.63
APOEP02649 SNORA71.2-201ENST00000364941 134 ntBASIC4.88□□□□□ -1.63
APOEP02649 AL590139.1-201ENST00000416267 400 ntBASIC4.88□□□□□ -1.63
APOEP02649 ATG4AP1-201ENST00000416893 538 ntBASIC4.88□□□□□ -1.63
APOEP02649 AC019050.1-201ENST00000418508 492 ntBASIC4.88□□□□□ -1.63
APOEP02649 AC140479.3-201ENST00000418944 1126 ntBASIC4.88□□□□□ -1.63
APOEP02649 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.88□□□□□ -1.63
APOEP02649 MTND6P18-201ENST00000439477 513 ntBASIC4.88□□□□□ -1.63
APOEP02649 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.88□□□□□ -1.63
APOEP02649 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.88□□□□□ -1.63
APOEP02649 TDGF1P1-201ENST00000445734 527 ntBASIC4.88□□□□□ -1.63
APOEP02649 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.88□□□□□ -1.63
APOEP02649 EIF2S2P5-201ENST00000457635 968 ntBASIC4.88□□□□□ -1.63
APOEP02649 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
APOEP02649 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.88□□□□□ -1.63
APOEP02649 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.88□□□□□ -1.63
APOEP02649 AP005119.2-201ENST00000579735 1105 ntBASIC4.88□□□□□ -1.63
APOEP02649 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.88□□□□□ -1.63
APOEP02649 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.88□□□□□ -1.63
APOEP02649 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.88□□□□□ -1.63
APOEP02649 SNORD91B-202ENST00000608459 222 ntBASIC4.88□□□□□ -1.63
APOEP02649 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.88□□□□□ -1.63
APOEP02649 MIR6780A-201ENST00000615089 68 ntBASIC4.88□□□□□ -1.63
APOEP02649 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
APOEP02649 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
APOEP02649 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.88□□□□□ -1.63
APOEP02649 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
APOEP02649 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.88□□□□□ -1.63
APOEP02649 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
APOEP02649 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
APOEP02649 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
APOEP02649 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
APOEP02649 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.87□□□□□ -1.63
APOEP02649 AL606537.1-201ENST00000607258 2011 ntBASIC4.87□□□□□ -1.63
APOEP02649 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
APOEP02649 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
APOEP02649 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
APOEP02649 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
APOEP02649 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
APOEP02649 RNU1-94P-201ENST00000362627 173 ntBASIC4.87□□□□□ -1.63
APOEP02649 RN7SKP115-201ENST00000363177 317 ntBASIC4.87□□□□□ -1.63
APOEP02649 RNVU1-6-201ENST00000364688 164 ntBASIC4.87□□□□□ -1.63
APOEP02649 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
APOEP02649 ATP5F1P2-201ENST00000398143 760 ntBASIC4.87□□□□□ -1.63
APOEP02649 RPS16P5-201ENST00000406501 404 ntBASIC4.87□□□□□ -1.63
APOEP02649 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.87□□□□□ -1.63
APOEP02649 RN7SKP106-201ENST00000410832 272 ntBASIC4.87□□□□□ -1.63
APOEP02649 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.87□□□□□ -1.63
APOEP02649 AC073136.2-201ENST00000417282 849 ntBASIC4.87□□□□□ -1.63
APOEP02649 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.87□□□□□ -1.63
APOEP02649 GTF2IP2-201ENST00000424290 697 ntBASIC4.87□□□□□ -1.63
APOEP02649 AL359265.2-201ENST00000434367 631 ntBASIC4.87□□□□□ -1.63
APOEP02649 AC097523.2-201ENST00000435551 652 ntBASIC4.87□□□□□ -1.63
APOEP02649 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.87□□□□□ -1.63
APOEP02649 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
APOEP02649 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.87□□□□□ -1.63
APOEP02649 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.87□□□□□ -1.63
APOEP02649 AC010326.1-201ENST00000462726 602 ntBASIC4.87□□□□□ -1.63
APOEP02649 RPS29P22-201ENST00000472363 168 ntBASIC4.87□□□□□ -1.63
APOEP02649 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.87□□□□□ -1.63
APOEP02649 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.87□□□□□ -1.63
APOEP02649 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.87□□□□□ -1.63
APOEP02649 AC079075.1-201ENST00000559543 878 ntBASIC4.87□□□□□ -1.63
APOEP02649 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.87□□□□□ -1.63
APOEP02649 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.87□□□□□ -1.63
APOEP02649 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.87□□□□□ -1.63
APOEP02649 AC104785.1-201ENST00000603220 588 ntBASIC4.87□□□□□ -1.63
APOEP02649 OR7M1P-201ENST00000608946 533 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms