Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
TNFP01375 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.46□□□□□ -1.69
TNFP01375 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
TNFP01375 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TNFP01375 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.46□□□□□ -1.7
TNFP01375 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.46□□□□□ -1.7
TNFP01375 SNORA70.2-201ENST00000364506 135 ntBASIC4.46□□□□□ -1.7
TNFP01375 RNA5SP509-201ENST00000364577 119 ntBASIC4.46□□□□□ -1.7
TNFP01375 MIR659-201ENST00000384963 97 ntBASIC4.46□□□□□ -1.7
TNFP01375 AL049693.1-201ENST00000402760 611 ntBASIC4.46□□□□□ -1.7
TNFP01375 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TNFP01375 AC092017.2-201ENST00000427600 362 ntBASIC4.46□□□□□ -1.7
TNFP01375 AP001324.1-201ENST00000428553 399 ntBASIC4.46□□□□□ -1.7
TNFP01375 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.46□□□□□ -1.7
TNFP01375 RPS26P24-201ENST00000497656 331 ntBASIC4.46□□□□□ -1.7
TNFP01375 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.46□□□□□ -1.7
TNFP01375 OR8A2P-201ENST00000528631 952 ntBASIC4.46□□□□□ -1.7
TNFP01375 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.46□□□□□ -1.7
TNFP01375 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.46□□□□□ -1.7
TNFP01375 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.46□□□□□ -1.7
TNFP01375 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.46□□□□□ -1.7
TNFP01375 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.46□□□□□ -1.7
TNFP01375 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.46□□□□□ -1.7
TNFP01375 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
TNFP01375 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.46□□□□□ -1.7
TNFP01375 MAPK10-286ENST00000641208 8747 ntBASIC4.46□□□□□ -1.7
TNFP01375 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.46□□□□□ -1.7
TNFP01375 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.46□□□□□ -1.7
TNFP01375 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.45□□□□□ -1.7
TNFP01375 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TNFP01375 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TNFP01375 AL355852.1-201ENST00000454081 1771 ntBASIC4.45□□□□□ -1.7
TNFP01375 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
TNFP01375 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TNFP01375 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TNFP01375 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TNFP01375 AC068538.1-201ENST00000376856 336 ntBASIC4.45□□□□□ -1.7
TNFP01375 RPL23AP59-201ENST00000399415 461 ntBASIC4.45□□□□□ -1.7
TNFP01375 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.45□□□□□ -1.7
TNFP01375 TMSB10P2-201ENST00000416049 131 ntBASIC4.45□□□□□ -1.7
TNFP01375 AC004690.1-201ENST00000418216 328 ntBASIC4.45□□□□□ -1.7
TNFP01375 FTLP19-201ENST00000433300 394 ntBASIC4.45□□□□□ -1.7
TNFP01375 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.45□□□□□ -1.7
TNFP01375 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.45□□□□□ -1.7
TNFP01375 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.45□□□□□ -1.7
TNFP01375 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.45□□□□□ -1.7
TNFP01375 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.45□□□□□ -1.7
TNFP01375 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TNFP01375 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.45□□□□□ -1.7
TNFP01375 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.45□□□□□ -1.7
TNFP01375 AC083829.1-201ENST00000503756 657 ntBASIC4.45□□□□□ -1.7
TNFP01375 AC025674.1-201ENST00000507074 324 ntBASIC4.45□□□□□ -1.7
TNFP01375 GOLGA5P1-201ENST00000507317 980 ntBASIC4.45□□□□□ -1.7
TNFP01375 HMGB3P16-201ENST00000508037 287 ntBASIC4.45□□□□□ -1.7
TNFP01375 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.45□□□□□ -1.7
TNFP01375 ADAD1P2-201ENST00000588476 646 ntBASIC4.45□□□□□ -1.7
TNFP01375 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.45□□□□□ -1.7
TNFP01375 AC006272.2-201ENST00000594725 163 ntBASIC4.45□□□□□ -1.7
TNFP01375 AC006065.6-201ENST00000625201 545 ntBASIC4.45□□□□□ -1.7
TNFP01375 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.45□□□□□ -1.7
TNFP01375 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TNFP01375 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TNFP01375 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TNFP01375 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.45□□□□□ -1.7
TNFP01375 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TNFP01375 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TNFP01375 AC019072.1-201ENST00000604535 1551 ntBASIC4.44□□□□□ -1.7
TNFP01375 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.44□□□□□ -1.7
TNFP01375 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TNFP01375 OR4K17-201ENST00000315543 1032 ntBASIC4.44□□□□□ -1.7
TNFP01375 OR56B2P-201ENST00000317102 954 ntBASIC4.44□□□□□ -1.7
TNFP01375 MTHFD2P5-201ENST00000320415 844 ntBASIC4.44□□□□□ -1.7
TNFP01375 RN7SKP74-201ENST00000362849 309 ntBASIC4.44□□□□□ -1.7
TNFP01375 AL445213.1-201ENST00000412589 747 ntBASIC4.44□□□□□ -1.7
TNFP01375 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.44□□□□□ -1.7
TNFP01375 GAPDHP49-201ENST00000421421 961 ntBASIC4.44□□□□□ -1.7
TNFP01375 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.44□□□□□ -1.7
TNFP01375 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.44□□□□□ -1.7
TNFP01375 AC068587.1-201ENST00000483613 781 ntBASIC4.44□□□□□ -1.7
TNFP01375 NIP7P2-201ENST00000485801 544 ntBASIC4.44□□□□□ -1.7
TNFP01375 AC020890.1-201ENST00000491837 504 ntBASIC4.44□□□□□ -1.7
TNFP01375 RN7SL810P-201ENST00000493031 276 ntBASIC4.44□□□□□ -1.7
TNFP01375 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.44□□□□□ -1.7
TNFP01375 AC106806.2-201ENST00000509365 500 ntBASIC4.44□□□□□ -1.7
TNFP01375 RNA5SP303-201ENST00000516192 130 ntBASIC4.44□□□□□ -1.7
TNFP01375 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.44□□□□□ -1.7
TNFP01375 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.44□□□□□ -1.7
TNFP01375 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.44□□□□□ -1.7
TNFP01375 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TNFP01375 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.44□□□□□ -1.7
TNFP01375 AL121890.3-201ENST00000618494 516 ntBASIC4.44□□□□□ -1.7
TNFP01375 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
TNFP01375 AC011944.2-201ENST00000624440 683 ntBASIC4.44□□□□□ -1.7
TNFP01375 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.44□□□□□ -1.7
TNFP01375 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TNFP01375 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.44□□□□□ -1.7
TNFP01375 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
TNFP01375 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TNFP01375 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
TNFP01375 AL356317.1-201ENST00000396110 1436 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms