Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RAPGEF3O95398 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
RAPGEF3O95398 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.36□□□□□ -1.23
RAPGEF3O95398 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RAPGEF3O95398 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RAPGEF3O95398 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RAPGEF3O95398 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
RAPGEF3O95398 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
RAPGEF3O95398 RAD1P1-201ENST00000231383 813 ntBASIC7.36□□□□□ -1.23
RAPGEF3O95398 RNU1-59P-201ENST00000364829 162 ntBASIC7.36□□□□□ -1.23
RAPGEF3O95398 ATP5F1P3-201ENST00000397213 657 ntBASIC7.36□□□□□ -1.23
RAPGEF3O95398 AL445189.1-201ENST00000405722 338 ntBASIC7.36□□□□□ -1.23
RAPGEF3O95398 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC7.36□□□□□ -1.23
RAPGEF3O95398 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC7.36□□□□□ -1.23
RAPGEF3O95398 RPS12P10-201ENST00000427031 377 ntBASIC7.36□□□□□ -1.23
RAPGEF3O95398 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC7.36□□□□□ -1.23
RAPGEF3O95398 AL512661.1-201ENST00000434586 1253 ntBASIC7.36□□□□□ -1.23
RAPGEF3O95398 AC000111.2-201ENST00000448200 210 ntBASIC7.36□□□□□ -1.23
RAPGEF3O95398 NUTF2P3-201ENST00000448540 384 ntBASIC7.36□□□□□ -1.23
RAPGEF3O95398 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC7.36□□□□□ -1.23
RAPGEF3O95398 AC096571.1-202ENST00000506634 735 ntBASIC7.36□□□□□ -1.23
RAPGEF3O95398 AC121161.1-201ENST00000510606 652 ntBASIC7.36□□□□□ -1.23
RAPGEF3O95398 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC7.36□□□□□ -1.23
RAPGEF3O95398 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RAPGEF3O95398 CIR1P1-201ENST00000524055 1133 ntBASIC7.36□□□□□ -1.23
RAPGEF3O95398 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC7.36□□□□□ -1.23
RAPGEF3O95398 AC025884.1-201ENST00000556034 378 ntBASIC7.36□□□□□ -1.23
RAPGEF3O95398 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC7.36□□□□□ -1.23
RAPGEF3O95398 AC069061.3-201ENST00000582254 823 ntBASIC7.36□□□□□ -1.23
RAPGEF3O95398 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC7.36□□□□□ -1.23
RAPGEF3O95398 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC7.36□□□□□ -1.23
RAPGEF3O95398 U1.25-201ENST00000614085 162 ntBASIC7.36□□□□□ -1.23
RAPGEF3O95398 U1.34-201ENST00000618578 162 ntBASIC7.36□□□□□ -1.23
RAPGEF3O95398 U1.31-201ENST00000620022 160 ntBASIC7.36□□□□□ -1.23
RAPGEF3O95398 METTL8-218ENST00000638989 876 ntTSL 5 BASIC7.36□□□□□ -1.23
RAPGEF3O95398 METTL8-219ENST00000640734 726 ntTSL 2 BASIC7.36□□□□□ -1.23
RAPGEF3O95398 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RAPGEF3O95398 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
RAPGEF3O95398 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.36□□□□□ -1.23
RAPGEF3O95398 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
RAPGEF3O95398 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
RAPGEF3O95398 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
RAPGEF3O95398 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RAPGEF3O95398 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RAPGEF3O95398 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RAPGEF3O95398 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RAPGEF3O95398 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC7.35□□□□□ -1.23
RAPGEF3O95398 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
RAPGEF3O95398 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RAPGEF3O95398 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
RAPGEF3O95398 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.35□□□□□ -1.23
RAPGEF3O95398 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC7.35□□□□□ -1.23
RAPGEF3O95398 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.35□□□□□ -1.23
RAPGEF3O95398 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC7.35□□□□□ -1.23
RAPGEF3O95398 AP000866.6-201ENST00000638898 3579 ntBASIC7.35□□□□□ -1.23
RAPGEF3O95398 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RAPGEF3O95398 RN7SKP145-201ENST00000363291 303 ntBASIC7.35□□□□□ -1.23
RAPGEF3O95398 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
RAPGEF3O95398 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RAPGEF3O95398 MTCO2P8-201ENST00000412213 658 ntBASIC7.35□□□□□ -1.23
RAPGEF3O95398 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC7.35□□□□□ -1.23
RAPGEF3O95398 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RAPGEF3O95398 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC7.35□□□□□ -1.23
RAPGEF3O95398 USP12PY-201ENST00000427677 1064 ntBASIC7.35□□□□□ -1.23
RAPGEF3O95398 TRBV26OR9-2-201ENST00000432077 293 ntBASIC7.35□□□□□ -1.23
RAPGEF3O95398 AC046176.1-201ENST00000435260 1170 ntBASIC7.35□□□□□ -1.23
RAPGEF3O95398 DUXAP8-207ENST00000456786 622 ntBASIC7.35□□□□□ -1.23
RAPGEF3O95398 snoU109.3-201ENST00000459477 145 ntBASIC7.35□□□□□ -1.23
RAPGEF3O95398 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC7.35□□□□□ -1.23
RAPGEF3O95398 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RAPGEF3O95398 WDR78-207ENST00000488333 613 ntTSL 3 BASIC7.35□□□□□ -1.23
RAPGEF3O95398 AC104971.1-201ENST00000495117 578 ntBASIC7.35□□□□□ -1.23
RAPGEF3O95398 RPS24P16-201ENST00000497294 392 ntBASIC7.35□□□□□ -1.23
RAPGEF3O95398 NDUFB4P12-201ENST00000513465 390 ntBASIC7.35□□□□□ -1.23
RAPGEF3O95398 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RAPGEF3O95398 BUD31P1-201ENST00000521828 359 ntBASIC7.35□□□□□ -1.23
RAPGEF3O95398 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC7.35□□□□□ -1.23
RAPGEF3O95398 AC105129.1-201ENST00000560250 297 ntBASIC7.35□□□□□ -1.23
RAPGEF3O95398 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC7.35□□□□□ -1.23
RAPGEF3O95398 AL049838.1-201ENST00000563647 981 ntBASIC7.35□□□□□ -1.23
RAPGEF3O95398 AC115286.1-201ENST00000604298 434 ntBASIC7.35□□□□□ -1.23
RAPGEF3O95398 AC004908.3-201ENST00000610248 625 ntBASIC7.35□□□□□ -1.23
RAPGEF3O95398 DUXAP10-204ENST00000612052 616 ntBASIC7.35□□□□□ -1.23
RAPGEF3O95398 AC093875.1-201ENST00000623688 504 ntBASIC7.35□□□□□ -1.23
RAPGEF3O95398 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC7.35□□□□□ -1.23
RAPGEF3O95398 AL596275.2-208ENST00000641192 594 ntBASIC7.35□□□□□ -1.23
RAPGEF3O95398 OR6C71P-202ENST00000641886 1107 ntBASIC7.35□□□□□ -1.23
RAPGEF3O95398 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.35□□□□□ -1.23
RAPGEF3O95398 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC7.35□□□□□ -1.23
RAPGEF3O95398 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RAPGEF3O95398 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RAPGEF3O95398 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RAPGEF3O95398 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RAPGEF3O95398 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
RAPGEF3O95398 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RAPGEF3O95398 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RAPGEF3O95398 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RAPGEF3O95398 AC239868.2-201ENST00000564237 4527 ntBASIC7.34□□□□□ -1.23
RAPGEF3O95398 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RAPGEF3O95398 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms