Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.82□□□□□ -1.64
NKX2-2O95096 MIR6768-201ENST00000610734 72 ntBASIC4.82□□□□□ -1.64
NKX2-2O95096 AL050303.3-201ENST00000613704 284 ntBASIC4.82□□□□□ -1.64
NKX2-2O95096 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.82□□□□□ -1.64
NKX2-2O95096 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.82□□□□□ -1.64
NKX2-2O95096 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.82□□□□□ -1.64
NKX2-2O95096 FRG1EP-201ENST00000634469 770 ntBASIC4.82□□□□□ -1.64
NKX2-2O95096 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-2O95096 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.82□□□□□ -1.64
NKX2-2O95096 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
NKX2-2O95096 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.82□□□□□ -1.64
NKX2-2O95096 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-2O95096 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.82□□□□□ -1.64
NKX2-2O95096 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-2O95096 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-2O95096 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.82□□□□□ -1.64
NKX2-2O95096 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
NKX2-2O95096 AC009313.2-201ENST00000417893 1941 ntBASIC4.82□□□□□ -1.64
NKX2-2O95096 AL022311.1-201ENST00000623726 19416 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-2O95096 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-2O95096 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.81□□□□□ -1.64
NKX2-2O95096 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NKX2-2O95096 MTND4P31-201ENST00000425607 1343 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-2O95096 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.81□□□□□ -1.64
NKX2-2O95096 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-2O95096 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-2O95096 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
NKX2-2O95096 RNU6-317P-201ENST00000384031 107 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 RNA5SP187-201ENST00000384400 119 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.81□□□□□ -1.64
NKX2-2O95096 MIR1182-201ENST00000408363 97 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 AC092745.2-202ENST00000411880 369 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.81□□□□□ -1.64
NKX2-2O95096 RPL35AP24-201ENST00000413846 330 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 TRGV6-201ENST00000417928 299 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.81□□□□□ -1.64
NKX2-2O95096 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.81□□□□□ -1.64
NKX2-2O95096 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.81□□□□□ -1.64
NKX2-2O95096 YWHAEP5-201ENST00000431545 765 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.81□□□□□ -1.64
NKX2-2O95096 CBX1P4-201ENST00000439415 457 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.81□□□□□ -1.64
NKX2-2O95096 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.81□□□□□ -1.64
NKX2-2O95096 AL606517.1-201ENST00000446914 387 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NKX2-2O95096 RNU6-1218P-201ENST00000458990 108 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 AC090602.1-201ENST00000469695 252 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-2O95096 AL161747.1-201ENST00000480068 358 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 UBE2V1P12-201ENST00000503954 474 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 AC097173.1-201ENST00000505862 819 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.81□□□□□ -1.64
NKX2-2O95096 AC147055.3-201ENST00000510547 851 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 RPL7L1P4-201ENST00000513004 707 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.81□□□□□ -1.64
NKX2-2O95096 AC021451.1-201ENST00000523498 1129 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-2O95096 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.81□□□□□ -1.64
NKX2-2O95096 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-2O95096 AC024940.3-201ENST00000538551 316 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.81□□□□□ -1.64
NKX2-2O95096 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-2O95096 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.81□□□□□ -1.64
NKX2-2O95096 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.81□□□□□ -1.64
NKX2-2O95096 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-2O95096 RN7SL339P-201ENST00000580597 296 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.81□□□□□ -1.64
NKX2-2O95096 MIR3176-201ENST00000582210 90 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 U6.48-201ENST00000618523 106 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.81□□□□□ -1.64
NKX2-2O95096 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.81□□□□□ -1.64
NKX2-2O95096 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.81□□□□□ -1.64
NKX2-2O95096 AC106754.1-201ENST00000562632 1513 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-2O95096 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-2O95096 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-2O95096 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
NKX2-2O95096 AC100871.1-201ENST00000507871 1456 ntBASIC4.81□□□□□ -1.64
NKX2-2O95096 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.81□□□□□ -1.64
NKX2-2O95096 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.81□□□□□ -1.64
NKX2-2O95096 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NKX2-2O95096 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.81□□□□□ -1.64
NKX2-2O95096 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-2O95096 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-2O95096 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-2O95096 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NKX2-2O95096 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-2O95096 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX2-2O95096 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-2O95096 AC073055.1-201ENST00000456901 1621 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 AC011493.1-201ENST00000596753 1632 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 AC235565.1-201ENST00000456962 1325 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
NKX2-2O95096 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-2O95096 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-2O95096 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 OR9K1P-201ENST00000326513 941 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 RNU6-236P-201ENST00000363886 106 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms