Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 UGT2B26P-201ENST00000508672 1613 ntBASIC5.52□□□□□ -1.53
VPS4BO75351 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4BO75351 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4BO75351 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4BO75351 AC109446.4-201ENST00000623235 2755 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4BO75351 AC016745.2-201ENST00000608834 3443 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4BO75351 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS4BO75351 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
VPS4BO75351 AL121950.1-201ENST00000624993 2077 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS4BO75351 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VPS4BO75351 RNU5A-2P-201ENST00000384337 116 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 MIR130A-201ENST00000385274 89 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 RNU6-244P-201ENST00000391028 104 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 U3.28-201ENST00000391249 210 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 AC005042.1-201ENST00000393397 800 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 AP000357.1-201ENST00000409926 1165 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 VTA1P1-201ENST00000414044 866 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS4BO75351 AC093155.2-201ENST00000420734 937 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS4BO75351 AC009784.1-201ENST00000426484 460 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.51□□□□□ -1.53
VPS4BO75351 UBE2V1P1-201ENST00000430836 445 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS4BO75351 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS4BO75351 SUMO2P3-201ENST00000438311 288 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS4BO75351 AL008629.1-201ENST00000438615 184 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 AC092170.1-201ENST00000440211 356 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 PTENP1-201ENST00000447117 1215 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS4BO75351 AC233982.1-201ENST00000451247 436 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 AL606490.1-201ENST00000452266 765 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 USP9YP25-201ENST00000457708 443 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 OR2AO1P-201ENST00000476497 403 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4BO75351 RN7SL570P-201ENST00000484405 292 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 AC091951.3-201ENST00000504093 246 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS4BO75351 DUTP7-201ENST00000507982 486 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 AC138938.1-201ENST00000515431 782 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 PRELID3BP4-201ENST00000515476 571 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS4BO75351 MTCO3P15-201ENST00000526563 574 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS4BO75351 OR10G5P-201ENST00000532733 358 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS4BO75351 GCSHP4-201ENST00000538792 439 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4BO75351 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS4BO75351 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.51□□□□□ -1.53
VPS4BO75351 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS4BO75351 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS4BO75351 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.51□□□□□ -1.53
VPS4BO75351 MIR1269B-201ENST00000580405 75 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 AC015726.1-201ENST00000602353 681 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 AL450489.1-201ENST00000612071 468 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 MIR6809-201ENST00000612189 116 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 AC090607.5-201ENST00000615692 224 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 OR8G7P-201ENST00000616658 848 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 VN1R7P-201ENST00000619242 903 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 AC109454.4-201ENST00000623411 649 ntBASIC5.51□□□□□ -1.53
VPS4BO75351 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS4BO75351 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4BO75351 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4BO75351 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS4BO75351 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4BO75351 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4BO75351 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4BO75351 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS4BO75351 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VPS4BO75351 AC104446.1-201ENST00000613728 1321 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 SEC63P2-201ENST00000503863 1939 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS4BO75351 AC007342.5-201ENST00000571340 2142 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS4BO75351 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS4BO75351 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS4BO75351 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS4BO75351 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS4BO75351 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS4BO75351 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VPS4BO75351 RNU1-150P-201ENST00000362491 162 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS4BO75351 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS4BO75351 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS4BO75351 RNU6-185P-201ENST00000384421 107 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VPS4BO75351 AC136624.1-201ENST00000400791 413 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 HMGB3P18-201ENST00000406327 590 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 RN7SKP216-201ENST00000411050 312 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS4BO75351 AC013404.1-201ENST00000413068 249 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS4BO75351 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS4BO75351 MORF4L1P6-201ENST00000418771 268 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 HIGD1AP12-201ENST00000427832 281 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms