Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX3O60493 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.73□□□□□ -1.65
SNX3O60493 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.73□□□□□ -1.65
SNX3O60493 AC074140.1-201ENST00000621617 208 ntBASIC4.73□□□□□ -1.65
SNX3O60493 FRG1DP-201ENST00000635586 771 ntBASIC4.73□□□□□ -1.65
SNX3O60493 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX3O60493 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX3O60493 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.73□□□□□ -1.65
SNX3O60493 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.73□□□□□ -1.65
SNX3O60493 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.73□□□□□ -1.65
SNX3O60493 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SNX3O60493 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX3O60493 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SNX3O60493 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX3O60493 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX3O60493 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX3O60493 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX3O60493 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX3O60493 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.73□□□□□ -1.65
SNX3O60493 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX3O60493 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.72□□□□□ -1.65
SNX3O60493 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNX3O60493 MTCO1P15-201ENST00000529569 1526 ntBASIC4.72□□□□□ -1.65
SNX3O60493 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
SNX3O60493 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.72□□□□□ -1.65
SNX3O60493 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX3O60493 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNX3O60493 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SNX3O60493 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNX3O60493 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.72□□□□□ -1.65
SNX3O60493 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX3O60493 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX3O60493 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SNX3O60493 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX3O60493 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SNX3O60493 RNU6-792P-201ENST00000363490 107 ntBASIC4.72□□□□□ -1.65
SNX3O60493 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNX3O60493 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.72□□□□□ -1.65
SNX3O60493 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX3O60493 RNA5SP345-201ENST00000410646 108 ntBASIC4.72□□□□□ -1.65
SNX3O60493 RN7SKP167-201ENST00000411047 285 ntBASIC4.72□□□□□ -1.65
SNX3O60493 AL390774.1-201ENST00000411924 246 ntBASIC4.72□□□□□ -1.65
SNX3O60493 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.72□□□□□ -1.65
SNX3O60493 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.72□□□□□ -1.65
SNX3O60493 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.72□□□□□ -1.65
SNX3O60493 UBE2V1P6-201ENST00000430840 422 ntBASIC4.72□□□□□ -1.65
SNX3O60493 CLNS1AP1-201ENST00000435954 682 ntBASIC4.72□□□□□ -1.65
SNX3O60493 AC002504.1-201ENST00000438281 691 ntBASIC4.72□□□□□ -1.65
SNX3O60493 RPL23AP23-201ENST00000452590 471 ntBASIC4.72□□□□□ -1.65
SNX3O60493 AL133244.1-201ENST00000456007 258 ntBASIC4.72□□□□□ -1.65
SNX3O60493 AC078857.1-201ENST00000469870 667 ntBASIC4.72□□□□□ -1.65
SNX3O60493 NPM1P17-201ENST00000479221 602 ntBASIC4.72□□□□□ -1.65
SNX3O60493 SYT14P1-201ENST00000481459 721 ntBASIC4.72□□□□□ -1.65
SNX3O60493 AC012158.1-204ENST00000483430 465 ntBASIC4.72□□□□□ -1.65
SNX3O60493 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.72□□□□□ -1.65
SNX3O60493 RN7SL205P-201ENST00000490174 284 ntBASIC4.72□□□□□ -1.65
SNX3O60493 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.72□□□□□ -1.65
SNX3O60493 PPBPP1-201ENST00000510807 373 ntBASIC4.72□□□□□ -1.65
SNX3O60493 AC108120.2-201ENST00000512973 294 ntBASIC4.72□□□□□ -1.65
SNX3O60493 RN7SKP183-201ENST00000517169 324 ntBASIC4.72□□□□□ -1.65
SNX3O60493 AC090151.1-201ENST00000520784 730 ntBASIC4.72□□□□□ -1.65
SNX3O60493 AP002373.2-201ENST00000541631 1060 ntBASIC4.72□□□□□ -1.65
SNX3O60493 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.72□□□□□ -1.65
SNX3O60493 AC018552.1-201ENST00000562099 811 ntBASIC4.72□□□□□ -1.65
SNX3O60493 AC106785.3-201ENST00000564064 847 ntBASIC4.72□□□□□ -1.65
SNX3O60493 MIR4675-201ENST00000577898 77 ntBASIC4.72□□□□□ -1.65
SNX3O60493 AC069307.1-201ENST00000602820 447 ntBASIC4.72□□□□□ -1.65
SNX3O60493 AC253576.2-201ENST00000618815 580 ntBASIC4.72□□□□□ -1.65
SNX3O60493 AL163051.2-201ENST00000618976 735 ntBASIC4.72□□□□□ -1.65
SNX3O60493 AL683826.1-201ENST00000624104 627 ntBASIC4.72□□□□□ -1.65
SNX3O60493 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.72□□□□□ -1.65
SNX3O60493 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.72□□□□□ -1.65
SNX3O60493 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX3O60493 ZNF733P-202ENST00000444809 1573 ntBASIC4.72□□□□□ -1.65
SNX3O60493 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNX3O60493 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.72□□□□□ -1.65
SNX3O60493 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.72□□□□□ -1.65
SNX3O60493 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNX3O60493 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNX3O60493 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
SNX3O60493 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
SNX3O60493 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
SNX3O60493 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
SNX3O60493 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SNX3O60493 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SNX3O60493 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SNX3O60493 HSPA8P17-201ENST00000427029 1382 ntBASIC4.71□□□□□ -1.66
SNX3O60493 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SNX3O60493 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SNX3O60493 MIR448-201ENST00000362131 111 ntBASIC4.71□□□□□ -1.66
SNX3O60493 RNU1-43P-201ENST00000365052 165 ntBASIC4.71□□□□□ -1.66
SNX3O60493 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SNX3O60493 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.71□□□□□ -1.66
SNX3O60493 RNU6-532P-201ENST00000384318 107 ntBASIC4.71□□□□□ -1.66
SNX3O60493 AL021331.1-201ENST00000402817 582 ntBASIC4.71□□□□□ -1.66
SNX3O60493 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.71□□□□□ -1.66
SNX3O60493 OR6K4P-201ENST00000423179 955 ntBASIC4.71□□□□□ -1.66
SNX3O60493 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX3O60493 FAM96AP1-201ENST00000430879 482 ntBASIC4.71□□□□□ -1.66
SNX3O60493 CYCSP11-201ENST00000436426 315 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms