Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC009229.4-201ENST00000623854 1947 ntBASIC4.82□□□□□ -1.64
TO15178 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TO15178 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TO15178 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TO15178 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TO15178 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
TO15178 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.81□□□□□ -1.64
TO15178 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.81□□□□□ -1.64
TO15178 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.81□□□□□ -1.64
TO15178 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
TO15178 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TO15178 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TO15178 RNU1-43P-201ENST00000365052 165 ntBASIC4.81□□□□□ -1.64
TO15178 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.81□□□□□ -1.64
TO15178 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TO15178 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TO15178 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TO15178 RNU6-244P-201ENST00000391028 104 ntBASIC4.81□□□□□ -1.64
TO15178 RNU6-796P-201ENST00000391086 107 ntBASIC4.81□□□□□ -1.64
TO15178 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TO15178 DUTP5-201ENST00000406790 469 ntBASIC4.81□□□□□ -1.64
TO15178 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TO15178 AC013410.2-201ENST00000422627 201 ntBASIC4.81□□□□□ -1.64
TO15178 AL355433.1-201ENST00000422804 300 ntBASIC4.81□□□□□ -1.64
TO15178 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.81□□□□□ -1.64
TO15178 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.81□□□□□ -1.64
TO15178 AC009238.2-201ENST00000431026 355 ntBASIC4.81□□□□□ -1.64
TO15178 AC092447.2-201ENST00000435487 669 ntBASIC4.81□□□□□ -1.64
TO15178 AL357520.1-201ENST00000441557 453 ntBASIC4.81□□□□□ -1.64
TO15178 RPL34P26-201ENST00000445636 354 ntBASIC4.81□□□□□ -1.64
TO15178 CYCSP42-201ENST00000450823 238 ntBASIC4.81□□□□□ -1.64
TO15178 BX842559.2-201ENST00000451418 605 ntBASIC4.81□□□□□ -1.64
TO15178 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.81□□□□□ -1.64
TO15178 AC008379.1-201ENST00000463655 464 ntBASIC4.81□□□□□ -1.64
TO15178 PPIAP21-201ENST00000464473 501 ntBASIC4.81□□□□□ -1.64
TO15178 METTL15P1-201ENST00000481421 1045 ntBASIC4.81□□□□□ -1.64
TO15178 AC072052.1-201ENST00000496556 306 ntBASIC4.81□□□□□ -1.64
TO15178 PPM1AP1-201ENST00000502740 1135 ntBASIC4.81□□□□□ -1.64
TO15178 AC133963.2-201ENST00000513686 578 ntBASIC4.81□□□□□ -1.64
TO15178 RNU6-1004P-201ENST00000516584 111 ntBASIC4.81□□□□□ -1.64
TO15178 SNORA31.13-201ENST00000516624 135 ntBASIC4.81□□□□□ -1.64
TO15178 RNA5SP34-201ENST00000516887 130 ntBASIC4.81□□□□□ -1.64
TO15178 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.81□□□□□ -1.64
TO15178 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.81□□□□□ -1.64
TO15178 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TO15178 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TO15178 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TO15178 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.81□□□□□ -1.64
TO15178 AC018552.3-201ENST00000567416 561 ntBASIC4.81□□□□□ -1.64
TO15178 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.81□□□□□ -1.64
TO15178 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.81□□□□□ -1.64
TO15178 MIR1269B-201ENST00000580405 75 ntBASIC4.81□□□□□ -1.64
TO15178 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.81□□□□□ -1.64
TO15178 AC124283.4-201ENST00000581815 456 ntBASIC4.81□□□□□ -1.64
TO15178 BNIP3P39-201ENST00000601077 554 ntBASIC4.81□□□□□ -1.64
TO15178 AC008759.3-201ENST00000613300 508 ntBASIC4.81□□□□□ -1.64
TO15178 AL512624.1-201ENST00000613638 469 ntBASIC4.81□□□□□ -1.64
TO15178 AC011472.4-201ENST00000615848 491 ntBASIC4.81□□□□□ -1.64
TO15178 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.81□□□□□ -1.64
TO15178 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TO15178 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.81□□□□□ -1.64
TO15178 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.81□□□□□ -1.64
TO15178 PHKBP1-201ENST00000450951 1951 ntBASIC4.81□□□□□ -1.64
TO15178 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TO15178 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TO15178 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TO15178 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
TO15178 AC083843.3-201ENST00000623679 2186 ntBASIC4.81□□□□□ -1.64
TO15178 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TO15178 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TO15178 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TO15178 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
TO15178 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TO15178 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.8□□□□□ -1.64
TO15178 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.8□□□□□ -1.64
TO15178 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
TO15178 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TO15178 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TO15178 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TO15178 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TO15178 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
TO15178 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.8□□□□□ -1.64
TO15178 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TO15178 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TO15178 RNU6-171P-201ENST00000384354 107 ntBASIC4.8□□□□□ -1.64
TO15178 MIR620-201ENST00000385232 95 ntBASIC4.8□□□□□ -1.64
TO15178 HMGB1P13-201ENST00000406019 642 ntBASIC4.8□□□□□ -1.64
TO15178 RNU6-603P-201ENST00000411403 107 ntBASIC4.8□□□□□ -1.64
TO15178 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.8□□□□□ -1.64
TO15178 AC105402.1-201ENST00000413336 545 ntBASIC4.8□□□□□ -1.64
TO15178 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.8□□□□□ -1.64
TO15178 AL158825.1-201ENST00000414735 521 ntBASIC4.8□□□□□ -1.64
TO15178 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.8□□□□□ -1.64
TO15178 BX664727.1-201ENST00000416024 466 ntBASIC4.8□□□□□ -1.64
TO15178 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.8□□□□□ -1.64
TO15178 DPY19L1P2-201ENST00000426647 915 ntBASIC4.8□□□□□ -1.64
TO15178 MTCO1P43-201ENST00000431831 488 ntBASIC4.8□□□□□ -1.64
TO15178 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.8□□□□□ -1.64
TO15178 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.8□□□□□ -1.64
TO15178 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms