Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 OR1F12-201ENST00000402365 945 ntBASIC7.94□□□□□ -1.14
CUX2O14529 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC7.94□□□□□ -1.14
CUX2O14529 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC7.94□□□□□ -1.14
CUX2O14529 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC7.94□□□□□ -1.14
CUX2O14529 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC7.94□□□□□ -1.14
CUX2O14529 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC7.94□□□□□ -1.14
CUX2O14529 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC7.94□□□□□ -1.14
CUX2O14529 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC7.94□□□□□ -1.14
CUX2O14529 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC7.94□□□□□ -1.14
CUX2O14529 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC7.94□□□□□ -1.14
CUX2O14529 DUX4L52-201ENST00000549363 777 ntBASIC7.94□□□□□ -1.14
CUX2O14529 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
CUX2O14529 AC010487.1-201ENST00000594408 1172 ntBASIC7.94□□□□□ -1.14
CUX2O14529 AL137058.3-201ENST00000624531 3099 ntBASIC7.94□□□□□ -1.14
CUX2O14529 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CUX2O14529 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.94□□□□□ -1.14
CUX2O14529 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CUX2O14529 AP005432.1-201ENST00000580891 3485 ntBASIC7.94□□□□□ -1.14
CUX2O14529 ABCC13-202ENST00000463099 3842 ntBASIC7.94□□□□□ -1.14
CUX2O14529 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CUX2O14529 AL161909.1-201ENST00000397390 712 ntBASIC7.94□□□□□ -1.14
CUX2O14529 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC7.94□□□□□ -1.14
CUX2O14529 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC7.94□□□□□ -1.14
CUX2O14529 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CUX2O14529 AC104849.1-201ENST00000462623 405 ntBASIC7.94□□□□□ -1.14
CUX2O14529 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC7.94□□□□□ -1.14
CUX2O14529 AC026403.1-201ENST00000518938 295 ntBASIC7.94□□□□□ -1.14
CUX2O14529 DUXAP2-201ENST00000519198 589 ntBASIC7.94□□□□□ -1.14
CUX2O14529 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
CUX2O14529 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC7.94□□□□□ -1.14
CUX2O14529 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
CUX2O14529 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC7.94□□□□□ -1.14
CUX2O14529 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CUX2O14529 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC7.93□□□□□ -1.14
CUX2O14529 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC7.93□□□□□ -1.14
CUX2O14529 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CUX2O14529 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CUX2O14529 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CUX2O14529 RNA5SP22-201ENST00000365393 109 ntBASIC7.93□□□□□ -1.14
CUX2O14529 MIR34B-201ENST00000385076 84 ntBASIC7.93□□□□□ -1.14
CUX2O14529 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC7.93□□□□□ -1.14
CUX2O14529 PARP4P3-201ENST00000510265 317 ntBASIC7.93□□□□□ -1.14
CUX2O14529 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC7.93□□□□□ -1.14
CUX2O14529 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC7.93□□□□□ -1.14
CUX2O14529 AC006116.5-201ENST00000591936 559 ntBASIC7.93□□□□□ -1.14
CUX2O14529 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CUX2O14529 AC018695.5-201ENST00000605872 315 ntBASIC7.93□□□□□ -1.14
CUX2O14529 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CUX2O14529 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CUX2O14529 AC015967.1-201ENST00000619893 476 ntBASIC7.93□□□□□ -1.14
CUX2O14529 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CUX2O14529 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
CUX2O14529 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC7.92□□□□□ -1.14
CUX2O14529 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC7.92□□□□□ -1.14
CUX2O14529 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
CUX2O14529 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CUX2O14529 RN7SKP13-201ENST00000515933 244 ntBASIC7.92□□□□□ -1.14
CUX2O14529 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC7.92□□□□□ -1.14
CUX2O14529 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.92□□□□□ -1.14
CUX2O14529 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC7.92□□□□□ -1.14
CUX2O14529 AC099669.2-201ENST00000616549 437 ntBASIC7.92□□□□□ -1.14
CUX2O14529 AC009093.8-201ENST00000641769 292 ntBASIC7.92□□□□□ -1.14
CUX2O14529 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CUX2O14529 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
CUX2O14529 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC7.92□□□□□ -1.14
CUX2O14529 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CUX2O14529 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CUX2O14529 SOCS5P3-201ENST00000425115 1576 ntBASIC7.91□□□□□ -1.14
CUX2O14529 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CUX2O14529 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
CUX2O14529 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.91□□□□□ -1.14
CUX2O14529 PCAT14-202ENST00000627127 3935 ntBASIC7.91□□□□□ -1.14
CUX2O14529 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CUX2O14529 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC7.91□□□□□ -1.14
CUX2O14529 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
CUX2O14529 AC009643.2-201ENST00000603543 1448 ntBASIC7.91□□□□□ -1.14
CUX2O14529 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
CUX2O14529 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CUX2O14529 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC7.91□□□□□ -1.14
CUX2O14529 OR5P1P-201ENST00000299512 925 ntBASIC7.91□□□□□ -1.14
CUX2O14529 AC007618.1-201ENST00000366455 732 ntBASIC7.91□□□□□ -1.14
CUX2O14529 RPS17P8-201ENST00000434525 335 ntBASIC7.91□□□□□ -1.14
CUX2O14529 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC7.91□□□□□ -1.14
CUX2O14529 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC7.91□□□□□ -1.14
CUX2O14529 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC7.91□□□□□ -1.14
CUX2O14529 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CUX2O14529 AC016559.2-201ENST00000510759 359 ntBASIC7.91□□□□□ -1.14
CUX2O14529 FTH1P21-201ENST00000512179 511 ntBASIC7.91□□□□□ -1.14
CUX2O14529 RNU4ATAC18P-201ENST00000516179 126 ntBASIC7.91□□□□□ -1.14
CUX2O14529 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC7.91□□□□□ -1.14
CUX2O14529 AC090515.3-201ENST00000560431 315 ntBASIC7.91□□□□□ -1.14
CUX2O14529 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC7.91□□□□□ -1.14
CUX2O14529 AC005000.2-201ENST00000605468 310 ntBASIC7.91□□□□□ -1.14
CUX2O14529 AC007546.1-201ENST00000619452 559 ntBASIC7.91□□□□□ -1.14
CUX2O14529 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CUX2O14529 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.91□□□□□ -1.14
CUX2O14529 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CUX2O14529 AC092162.3-201ENST00000624511 1624 ntBASIC7.91□□□□□ -1.14
CUX2O14529 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CUX2O14529 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms