Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AC239868.2-201ENST00000564237 4527 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC007159.1-201ENST00000566529 4706 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 SNORD1C-201ENST00000363315 78 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 Y_RNA.248-201ENST00000364501 109 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 DEFB108C-201ENST00000400154 252 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 MTND1P21-201ENST00000412991 285 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC245096.1-201ENST00000413104 546 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 CDK8P2-201ENST00000415020 547 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 TCEA1P4-201ENST00000415066 844 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC245884.2-201ENST00000426257 404 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC009784.1-201ENST00000426484 460 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AL121601.2-201ENST00000438019 707 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 GTF3AP5-201ENST00000442645 697 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 COX6CP2-201ENST00000444980 225 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC002553.2-201ENST00000453217 340 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 RPL35AP19-201ENST00000469425 329 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC011979.1-201ENST00000472300 483 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 SETP11-201ENST00000473027 690 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC104763.1-201ENST00000475274 360 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC126182.1-201ENST00000478134 357 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 CCDC11P1-201ENST00000503137 1162 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC112198.1-201ENST00000505369 1220 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AP001000.1-201ENST00000526843 742 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC016957.1-201ENST00000534895 309 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 MIR4701-201ENST00000583094 63 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC005224.3-201ENST00000584683 2140 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 WISP1-OT1-201ENST00000602893 642 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 U73023.1-201ENST00000603134 700 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AL392112.1-201ENST00000605115 829 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AL645933.2-201ENST00000606743 1207 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AP002360.3-201ENST00000607673 710 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC015819.1-201ENST00000613588 663 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC096861.1-201ENST00000616652 240 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC016769.4-201ENST00000616893 535 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AC010325.3-201ENST00000641084 394 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 STX3-208ENST00000641815 3236 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AL161756.3-201ENST00000641216 2071 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 SNX18P3-202ENST00000565670 1750 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AL445437.1-201ENST00000623157 3087 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 CAP1P2-201ENST00000417455 1409 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 AL353796.1-201ENST00000561542 3241 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 TTC41P-205ENST00000551270 3963 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.79□□□□□ -1.64
CGB1A6NKQ9 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
CGB1A6NKQ9 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.79□□□□□ -1.64
CGB1A6NKQ9 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CGB1A6NKQ9 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms