Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.92□□□□□ -1.62
TRIM4Q9C037 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
TRIM4Q9C037 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
TRIM4Q9C037 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
TRIM4Q9C037 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM4Q9C037 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM4Q9C037 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM4Q9C037 RNA5SP455-201ENST00000365190 119 ntBASIC4.91□□□□□ -1.62
TRIM4Q9C037 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM4Q9C037 RNU1-74P-201ENST00000384108 171 ntBASIC4.91□□□□□ -1.62
TRIM4Q9C037 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TRIM4Q9C037 AL139039.2-201ENST00000407436 479 ntBASIC4.91□□□□□ -1.62
TRIM4Q9C037 AC013429.2-201ENST00000418798 781 ntBASIC4.91□□□□□ -1.62
TRIM4Q9C037 AC093655.2-201ENST00000425735 631 ntBASIC4.91□□□□□ -1.62
TRIM4Q9C037 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM4Q9C037 AC069285.2-201ENST00000440210 275 ntBASIC4.91□□□□□ -1.62
TRIM4Q9C037 AC092647.2-201ENST00000452998 253 ntBASIC4.91□□□□□ -1.62
TRIM4Q9C037 CCDC75P1-201ENST00000469247 791 ntBASIC4.91□□□□□ -1.62
TRIM4Q9C037 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM4Q9C037 AC022133.1-201ENST00000490961 571 ntBASIC4.91□□□□□ -1.62
TRIM4Q9C037 AC034205.1-201ENST00000520621 638 ntBASIC4.91□□□□□ -1.62
TRIM4Q9C037 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM4Q9C037 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM4Q9C037 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.91□□□□□ -1.62
TRIM4Q9C037 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM4Q9C037 MIR4284-201ENST00000578924 81 ntBASIC4.91□□□□□ -1.62
TRIM4Q9C037 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.91□□□□□ -1.62
TRIM4Q9C037 AC026979.4-201ENST00000606555 645 ntBASIC4.91□□□□□ -1.62
TRIM4Q9C037 AC090527.3-201ENST00000619041 548 ntBASIC4.91□□□□□ -1.62
TRIM4Q9C037 AL023881.1-201ENST00000621088 301 ntBASIC4.91□□□□□ -1.62
TRIM4Q9C037 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM4Q9C037 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM4Q9C037 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TRIM4Q9C037 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM4Q9C037 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM4Q9C037 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.9□□□□□ -1.62
TRIM4Q9C037 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM4Q9C037 SNURFL-201ENST00000309296 343 ntBASIC4.9□□□□□ -1.63
TRIM4Q9C037 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM4Q9C037 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM4Q9C037 SNORA48.7-201ENST00000391302 135 ntBASIC4.9□□□□□ -1.63
TRIM4Q9C037 AL160275.2-201ENST00000412010 394 ntBASIC4.9□□□□□ -1.63
TRIM4Q9C037 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM4Q9C037 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.9□□□□□ -1.63
TRIM4Q9C037 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM4Q9C037 RPL5P30-201ENST00000465511 891 ntBASIC4.9□□□□□ -1.63
TRIM4Q9C037 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.9□□□□□ -1.63
TRIM4Q9C037 VWA8P1-201ENST00000510889 176 ntBASIC4.9□□□□□ -1.63
TRIM4Q9C037 NPM1P6-201ENST00000521088 871 ntBASIC4.9□□□□□ -1.63
TRIM4Q9C037 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.9□□□□□ -1.63
TRIM4Q9C037 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM4Q9C037 AC009117.1-201ENST00000563948 554 ntBASIC4.9□□□□□ -1.63
TRIM4Q9C037 AL161637.1-201ENST00000622380 412 ntBASIC4.9□□□□□ -1.63
TRIM4Q9C037 AC055839.1-201ENST00000634467 498 ntBASIC4.9□□□□□ -1.63
TRIM4Q9C037 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
TRIM4Q9C037 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM4Q9C037 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM4Q9C037 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM4Q9C037 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
TRIM4Q9C037 IQCB2P-201ENST00000401788 1633 ntBASIC4.9□□□□□ -1.63
TRIM4Q9C037 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
TRIM4Q9C037 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM4Q9C037 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM4Q9C037 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TRIM4Q9C037 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM4Q9C037 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM4Q9C037 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM4Q9C037 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TRIM4Q9C037 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM4Q9C037 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM4Q9C037 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM4Q9C037 FAM3C2-201ENST00000312214 681 ntBASIC4.89□□□□□ -1.63
TRIM4Q9C037 RNA5SP90-201ENST00000364801 99 ntBASIC4.89□□□□□ -1.63
TRIM4Q9C037 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM4Q9C037 AC009238.2-201ENST00000431026 355 ntBASIC4.89□□□□□ -1.63
TRIM4Q9C037 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM4Q9C037 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM4Q9C037 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.89□□□□□ -1.63
TRIM4Q9C037 AC010469.1-201ENST00000463864 576 ntBASIC4.89□□□□□ -1.63
TRIM4Q9C037 AC090589.1-201ENST00000473109 362 ntBASIC4.89□□□□□ -1.63
TRIM4Q9C037 AC020890.1-201ENST00000491837 504 ntBASIC4.89□□□□□ -1.63
TRIM4Q9C037 AC005412.2-201ENST00000492004 341 ntBASIC4.89□□□□□ -1.63
TRIM4Q9C037 AC138409.2-202ENST00000507274 458 ntBASIC4.89□□□□□ -1.63
TRIM4Q9C037 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM4Q9C037 HNRNPRP2-201ENST00000528421 743 ntBASIC4.89□□□□□ -1.63
TRIM4Q9C037 AC021006.3-201ENST00000530771 192 ntBASIC4.89□□□□□ -1.63
TRIM4Q9C037 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.89□□□□□ -1.63
TRIM4Q9C037 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.89□□□□□ -1.63
TRIM4Q9C037 AC136624.4-201ENST00000573044 370 ntBASIC4.89□□□□□ -1.63
TRIM4Q9C037 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.89□□□□□ -1.63
TRIM4Q9C037 AC087468.1-201ENST00000604365 630 ntBASIC4.89□□□□□ -1.63
TRIM4Q9C037 MIR92B-201ENST00000607575 96 ntBASIC4.89□□□□□ -1.63
TRIM4Q9C037 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
TRIM4Q9C037 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM4Q9C037 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM4Q9C037 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM4Q9C037 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM4Q9C037 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM4Q9C037 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
TRIM4Q9C037 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms