Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AL359955.1-201ENST00000455242 3275 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AC023490.2-201ENST00000359859 470 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 Y_RNA.18-201ENST00000362461 102 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 SNORD1C-201ENST00000363315 78 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 Y_RNA.194-201ENST00000363985 102 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 RN7SKP186-201ENST00000365371 303 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 MIR433-201ENST00000384837 93 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 ATP5F1P4-201ENST00000397288 746 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 PSMA6P1-201ENST00000400275 741 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 RN7SKP240-201ENST00000410583 375 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 RN7SKP17-201ENST00000411242 351 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 RPS15AP38-201ENST00000413110 372 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 ZNF736P2Y-201ENST00000416040 1279 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 MTCO3P1-205ENST00000422088 832 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AC115283.1-201ENST00000427353 400 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 PSMD10P2-201ENST00000432890 672 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 GAPDHP59-201ENST00000435908 267 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 MTND2P19-201ENST00000449129 1012 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 RPS15AP1-201ENST00000457423 391 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 RN7SL39P-201ENST00000462264 297 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AP002884.1-201ENST00000479691 655 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 RNU6-202P-201ENST00000515998 96 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 SCARNA5-201ENST00000516201 276 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 HIGD1AP10-201ENST00000527837 282 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 RFPL1S-203ENST00000539579 330 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 HSPE1P2-201ENST00000554777 306 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AC026826.3-201ENST00000561747 158 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AC090616.1-201ENST00000583895 447 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AC090236.2-201ENST00000587933 1101 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AC008687.2-201ENST00000597865 520 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 PSMA6P4-201ENST00000603247 718 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 SNORD96A-201ENST00000606577 79 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AC013562.2-201ENST00000611632 603 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AL122023.1-201ENST00000622847 530 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AC073488.9-201ENST00000631601 754 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 OR7E91P-202ENST00000642062 1198 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 KYNUP3-201ENST00000574386 1341 ntBASIC6.24□□□□□ -1.41
TRIM55Q9BYV6 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms