Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 RNA5SP350-201ENST00000363298 111 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 SNORD35A-201ENST00000363389 86 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 RNY4P14-201ENST00000363656 96 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 RNU6-501P-201ENST00000364072 100 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 Y_RNA.263-201ENST00000364659 114 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 Y_RNA.302-201ENST00000364997 102 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 MIR188-201ENST00000385034 86 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 MTND4LP17-201ENST00000414607 293 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 HMGB3P23-201ENST00000414981 585 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC009237.2-201ENST00000421358 284 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 RPL7AP14-201ENST00000424041 802 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 YWHAZP2-201ENST00000440317 728 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AL512593.1-201ENST00000444758 779 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 POU5F1P5-201ENST00000445059 658 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC007677.1-201ENST00000445757 515 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC239367.2-201ENST00000447309 705 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC005002.1-201ENST00000447458 540 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 RPL7P31-201ENST00000450192 724 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 RFC5P1-201ENST00000454419 874 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 PSAT1P4-201ENST00000466500 526 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC013828.1-201ENST00000481845 158 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC112484.3-201ENST00000505910 329 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 LRRC34P2-201ENST00000514850 553 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 RNA5SP441-201ENST00000516809 88 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 OR5AK3P-201ENST00000527486 1297 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 NPIPB14P-203ENST00000532298 987 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AL049870.4-201ENST00000555741 486 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AL078601.3-201ENST00000573303 535 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 MIR548AB-201ENST00000584917 84 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC063977.5-201ENST00000601044 974 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC008536.2-201ENST00000607284 349 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC005899.7-201ENST00000618199 588 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AL591926.1-201ENST00000620542 217 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AL683826.1-201ENST00000624104 627 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 TMCC1P1-201ENST00000518897 1980 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 SEC63P2-201ENST00000503863 1939 ntBASIC5.33□□□□□ -1.56
SSBP3Q9BWW4 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 RNA5SP333-201ENST00000363466 118 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 RNU6-374P-201ENST00000364146 108 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 RNU6-621P-201ENST00000364752 109 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 RNA5SP334-201ENST00000364825 118 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 Y_RNA.402-201ENST00000383972 102 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 MIR621-201ENST00000384919 96 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 CYCSP45-201ENST00000402289 315 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AL590004.1-201ENST00000405321 300 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 SNORA11.5-201ENST00000408163 128 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 MIR1275-201ENST00000408770 80 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 PIGPP2-201ENST00000411569 458 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 RPL17P12-201ENST00000413391 526 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 RPL21P111-201ENST00000418453 477 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms