Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USB1Q9BQ65 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USB1Q9BQ65 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
USB1Q9BQ65 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 AL161781.1-201ENST00000354277 403 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 Y_RNA.80-201ENST00000362996 102 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 Y_RNA.378-201ENST00000365652 113 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 MRPL55-211ENST00000366738 705 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USB1Q9BQ65 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 RNY1P14-201ENST00000384426 108 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 EIF5P1-201ENST00000400019 1231 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 RNU2-29P-201ENST00000410423 189 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 RNU4-6P-201ENST00000410804 122 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 AL356968.1-201ENST00000416622 474 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 RPL36AP36-201ENST00000418616 301 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 RPL23AP34-201ENST00000423483 410 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 OR4F2P-201ENST00000424047 938 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 RPS26P40-201ENST00000435209 294 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 AC093156.1-201ENST00000440382 670 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 RPL23AP15-201ENST00000450202 459 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 RNU7-182P-201ENST00000459009 62 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 RPS20P21-201ENST00000466859 343 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 RN7SL201P-201ENST00000482306 296 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 AC116353.1-201ENST00000489727 316 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 RPL23AP72-201ENST00000492447 435 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 HNRNPA1P44-201ENST00000503999 879 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 AC008638.1-201ENST00000506035 866 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 RN7SKP99-201ENST00000517028 307 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 RNU6-789P-201ENST00000517105 102 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 TRIM51DP-201ENST00000529746 596 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 AC128657.1-201ENST00000549459 145 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 AC007375.1-201ENST00000554513 578 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 UBE2Q2P11-201ENST00000559691 205 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 AC018552.3-201ENST00000567416 561 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 DTNA-220ENST00000590831 847 ntTSL 2 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 AL683813.2-201ENST00000605245 502 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 AP004247.4-201ENST00000608484 942 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 AC004839.1-201ENST00000610269 501 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 AC107871.2-201ENST00000612894 502 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 AC140479.4-205ENST00000636339 820 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 AL669831.3-213ENST00000636676 183 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 AC087885.1-201ENST00000641910 848 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
USB1Q9BQ65 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USB1Q9BQ65 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 AL139811.2-201ENST00000373465 1630 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
USB1Q9BQ65 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 SCOC-AS1-201ENST00000512692 1987 ntTSL 2 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 AC003973.3-201ENST00000624863 2822 ntBASIC7.04□□□□□ -1.28
USB1Q9BQ65 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC7.04□□□□□ -1.28
USB1Q9BQ65 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USB1Q9BQ65 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
USB1Q9BQ65 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USB1Q9BQ65 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
USB1Q9BQ65 AP000766.1-201ENST00000561746 4140 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 MTCO1P7-201ENST00000419523 1542 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USB1Q9BQ65 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
USB1Q9BQ65 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USB1Q9BQ65 AL139276.1-201ENST00000311910 1001 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 RNA5SP149-201ENST00000364952 92 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 Y_RNA.463-201ENST00000384271 102 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 RNU6-39P-201ENST00000384344 107 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 AL360271.1-201ENST00000395679 510 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 AL356421.1-201ENST00000403255 413 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 AC092832.1-201ENST00000422934 400 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 RBMY2JP-201ENST00000425544 1059 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 ANXA2P2-201ENST00000435128 1020 ntBASIC7.03□□□□□ -1.28
USB1Q9BQ65 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC7.03□□□□□ -1.28
USB1Q9BQ65 MTCO3P2-201ENST00000457365 171 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms