Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SSX3Q99909 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSX3Q99909 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSX3Q99909 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SSX3Q99909 AL121886.1-201ENST00000358609 435 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 RNA5SP326-201ENST00000363209 110 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 RNU4-74P-201ENST00000411280 161 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 AC007738.1-201ENST00000413892 348 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 PCNPP4-201ENST00000414817 517 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.45□□□□□ -1.7
SSX3Q99909 MTND2P11-201ENST00000423638 648 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 GTF2IP2-201ENST00000424290 697 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 RPS4XP16-201ENST00000427198 791 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.45□□□□□ -1.7
SSX3Q99909 CYCSP6-201ENST00000434498 302 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 CYCSP12-201ENST00000437729 300 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.45□□□□□ -1.7
SSX3Q99909 AC074367.1-201ENST00000438685 1125 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 EEF1A1P1-201ENST00000447052 739 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.45□□□□□ -1.7
SSX3Q99909 AL596266.1-201ENST00000448132 400 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 RPL23AP23-201ENST00000452590 471 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 RPL7P45-201ENST00000455851 743 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.45□□□□□ -1.7
SSX3Q99909 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.45□□□□□ -1.7
SSX3Q99909 AC021193.1-201ENST00000511607 420 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.45□□□□□ -1.7
SSX3Q99909 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.45□□□□□ -1.7
SSX3Q99909 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.45□□□□□ -1.7
SSX3Q99909 SNORD116-26-201ENST00000516006 96 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 RNA5SP464-201ENST00000516251 108 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.45□□□□□ -1.7
SSX3Q99909 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.45□□□□□ -1.7
SSX3Q99909 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSX3Q99909 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.45□□□□□ -1.7
SSX3Q99909 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSX3Q99909 AC004825.1-201ENST00000555068 586 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.45□□□□□ -1.7
SSX3Q99909 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.45□□□□□ -1.7
SSX3Q99909 OR1F2P-201ENST00000570470 933 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 HNRNPCP4-201ENST00000571636 900 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.45□□□□□ -1.7
SSX3Q99909 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.45□□□□□ -1.7
SSX3Q99909 AC006213.5-201ENST00000619673 288 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 AL023881.1-201ENST00000621088 301 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 AC015871.5-202ENST00000623252 701 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 AP006248.3-201ENST00000623580 594 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 CASC19-264ENST00000641912 1184 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSX3Q99909 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
SSX3Q99909 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.45□□□□□ -1.7
SSX3Q99909 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSX3Q99909 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SSX3Q99909 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSX3Q99909 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.45□□□□□ -1.7
SSX3Q99909 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSX3Q99909 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSX3Q99909 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 ZNF90P1-201ENST00000480493 1951 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSX3Q99909 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSX3Q99909 AC068870.1-201ENST00000563737 2455 ntBASIC4.45□□□□□ -1.7
SSX3Q99909 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
SSX3Q99909 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.44□□□□□ -1.7
SSX3Q99909 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSX3Q99909 OR4F13P-202ENST00000560066 2054 ntBASIC4.44□□□□□ -1.7
SSX3Q99909 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.44□□□□□ -1.7
SSX3Q99909 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSX3Q99909 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSX3Q99909 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSX3Q99909 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.44□□□□□ -1.7
SSX3Q99909 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSX3Q99909 Y_RNA.110-201ENST00000363220 99 ntBASIC4.44□□□□□ -1.7
SSX3Q99909 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSX3Q99909 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSX3Q99909 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSX3Q99909 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.44□□□□□ -1.7
SSX3Q99909 RNU4-31P-201ENST00000384211 141 ntBASIC4.44□□□□□ -1.7
SSX3Q99909 RNU1-77P-201ENST00000390868 162 ntBASIC4.44□□□□□ -1.7
SSX3Q99909 MIR1286-201ENST00000408112 78 ntBASIC4.44□□□□□ -1.7
SSX3Q99909 AC010385.1-201ENST00000412374 256 ntBASIC4.44□□□□□ -1.7
SSX3Q99909 RPL7L1P9-201ENST00000431298 745 ntBASIC4.44□□□□□ -1.7
SSX3Q99909 NDUFB4P8-201ENST00000435351 367 ntBASIC4.44□□□□□ -1.7
SSX3Q99909 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.44□□□□□ -1.7
SSX3Q99909 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.44□□□□□ -1.7
SSX3Q99909 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.44□□□□□ -1.7
SSX3Q99909 AC245028.2-201ENST00000458673 253 ntBASIC4.44□□□□□ -1.7
SSX3Q99909 AC026348.1-201ENST00000462549 1053 ntBASIC4.44□□□□□ -1.7
SSX3Q99909 AL591473.1-201ENST00000464297 313 ntBASIC4.44□□□□□ -1.7
SSX3Q99909 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.44□□□□□ -1.7
SSX3Q99909 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.44□□□□□ -1.7
SSX3Q99909 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSX3Q99909 AC008628.1-201ENST00000508663 265 ntBASIC4.44□□□□□ -1.7
SSX3Q99909 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.44□□□□□ -1.7
SSX3Q99909 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSX3Q99909 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.44□□□□□ -1.7
SSX3Q99909 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.44□□□□□ -1.7
SSX3Q99909 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms