Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.17□□□□□ -1.42
NUP88Q99567 AC211486.3-201ENST00000412694 621 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 MTATP6P20-201ENST00000414147 562 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.17□□□□□ -1.42
NUP88Q99567 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 AC246680.2-201ENST00000422106 389 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 AC009784.1-201ENST00000426484 460 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.17□□□□□ -1.42
NUP88Q99567 RPS27P18-201ENST00000431701 247 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 MTCO1P52-201ENST00000433928 531 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.17□□□□□ -1.42
NUP88Q99567 AC073465.2-201ENST00000440938 498 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 RPS11P7-201ENST00000442125 465 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.17□□□□□ -1.42
NUP88Q99567 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
NUP88Q99567 AC092647.2-201ENST00000452998 253 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 AC023050.1-201ENST00000498198 304 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NUP88Q99567 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.17□□□□□ -1.42
NUP88Q99567 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.17□□□□□ -1.42
NUP88Q99567 SCARNA20.4-201ENST00000516969 131 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 OR10V3P-201ENST00000525712 725 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 AC008083.2-201ENST00000546707 476 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.17□□□□□ -1.42
NUP88Q99567 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.17□□□□□ -1.42
NUP88Q99567 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.17□□□□□ -1.42
NUP88Q99567 MTATP6P24-201ENST00000576835 677 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.17□□□□□ -1.42
NUP88Q99567 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.17□□□□□ -1.42
NUP88Q99567 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC6.17□□□□□ -1.42
NUP88Q99567 AL160237.3-201ENST00000604114 1013 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 AC005377.1-201ENST00000605126 456 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 AL139124.1-201ENST00000609123 421 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 AC096586.1-201ENST00000610267 561 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 Mico1.1-201ENST00000611698 204 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 AC009163.6-201ENST00000612367 342 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 AC004232.3-201ENST00000622977 525 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 AP003497.2-201ENST00000624220 967 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 AP000550.3-201ENST00000637734 379 ntBASIC6.17□□□□□ -1.42
NUP88Q99567 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NUP88Q99567 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
NUP88Q99567 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
NUP88Q99567 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
NUP88Q99567 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.17□□□□□ -1.42
NUP88Q99567 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
NUP88Q99567 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
NUP88Q99567 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NUP88Q99567 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NUP88Q99567 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NUP88Q99567 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NUP88Q99567 PCF11-AS1-201ENST00000602322 1516 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
NUP88Q99567 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
NUP88Q99567 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NUP88Q99567 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NUP88Q99567 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NUP88Q99567 AL589647.1-201ENST00000402485 466 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 RN7SKP222-201ENST00000410651 315 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 GPS2P1-201ENST00000411761 986 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.16□□□□□ -1.42
NUP88Q99567 HMGB3P31-201ENST00000413333 595 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 AL449283.1-202ENST00000418249 604 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 AC093162.1-201ENST00000419682 124 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 EI24P4-201ENST00000423683 1078 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.16□□□□□ -1.42
NUP88Q99567 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NUP88Q99567 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC6.16□□□□□ -1.42
NUP88Q99567 AL035246.1-201ENST00000433554 1255 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 MTND2P2-201ENST00000434633 945 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 CEACAMP7-201ENST00000444105 496 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 AL358794.1-201ENST00000445689 381 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.16□□□□□ -1.42
NUP88Q99567 MTND2P8-201ENST00000450555 1025 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.16□□□□□ -1.42
NUP88Q99567 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.16□□□□□ -1.42
NUP88Q99567 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NUP88Q99567 RPL7P48-201ENST00000461513 746 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.16□□□□□ -1.42
NUP88Q99567 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.16□□□□□ -1.42
NUP88Q99567 AC037198.2-201ENST00000478845 733 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 CR383656.1-201ENST00000484916 377 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.16□□□□□ -1.42
NUP88Q99567 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.16□□□□□ -1.42
NUP88Q99567 AC026414.1-201ENST00000504046 698 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 RN7SKP66-201ENST00000516681 231 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.16□□□□□ -1.42
NUP88Q99567 AC079064.1-201ENST00000528365 362 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 AC024940.3-201ENST00000538551 316 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.16□□□□□ -1.42
NUP88Q99567 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.16□□□□□ -1.42
NUP88Q99567 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
NUP88Q99567 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.16□□□□□ -1.42
NUP88Q99567 MIR548Y-201ENST00000582739 110 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 AP001160.4-201ENST00000596971 382 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 AC095055.1-201ENST00000603472 1113 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 AL022394.1-201ENST00000606979 292 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 PART1_2.1-201ENST00000612397 250 ntBASIC6.16□□□□□ -1.42
NUP88Q99567 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms