Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX18Q96RF0 RPL23AP44-201ENST00000482216 473 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 AC073610.1-201ENST00000489971 396 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 AC093890.1-201ENST00000502554 540 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 AC008565.1-201ENST00000509046 885 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 GAPDHP62-201ENST00000515313 990 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 AL354943.1-201ENST00000572103 781 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SNX18Q96RF0 AC121247.2-201ENST00000604776 136 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 AC100767.2-201ENST00000604840 693 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 AL122125.1-201ENST00000616999 600 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 AC129915.3-201ENST00000634128 948 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 MIR1322-201ENST00000638013 71 ntBASIC5.17□□□□□ -1.58
SNX18Q96RF0 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX18Q96RF0 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX18Q96RF0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX18Q96RF0 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX18Q96RF0 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX18Q96RF0 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SNX18Q96RF0 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX18Q96RF0 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX18Q96RF0 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SNX18Q96RF0 AC111188.2-201ENST00000529697 1387 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SNX18Q96RF0 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SNX18Q96RF0 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNX18Q96RF0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 METTL21EP-201ENST00000298105 713 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 RNA5SP477-201ENST00000362639 119 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 RNU6-666P-201ENST00000363499 107 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 RNU6-83P-201ENST00000384568 112 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 RPS27AP11-201ENST00000402798 447 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 AL590084.1-201ENST00000407885 387 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 AC002524.1-201ENST00000411687 547 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 AC211486.3-201ENST00000412694 621 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 RAP1BP1-201ENST00000412709 553 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 USP9YP26-201ENST00000421008 661 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 RAC1P8-201ENST00000427086 527 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 RPL34P6-201ENST00000432390 345 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 UBE2D3P1-201ENST00000436669 444 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 AL353093.1-201ENST00000441292 436 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 AC073109.1-201ENST00000445066 978 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 AC104978.1-201ENST00000449387 391 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SNX18Q96RF0 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 AL122020.1-201ENST00000472287 459 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SNX18Q96RF0 AC069528.1-202ENST00000482888 637 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 MTND1P22-201ENST00000510572 951 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 AC114781.3-201ENST00000512083 142 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 RNU5A-4P-201ENST00000516588 111 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 AC010306.1-201ENST00000523223 1117 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 AC025260.1-201ENST00000548858 430 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 AC090695.1-201ENST00000561269 1222 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 AC095057.3-201ENST00000567102 1157 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 AC012146.2-201ENST00000576545 416 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 AP005136.1-201ENST00000579765 429 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNX18Q96RF0 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNX18Q96RF0 AC018638.7-201ENST00000605836 1114 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 AP003392.5-201ENST00000607857 415 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.16□□□□□ -1.58
SNX18Q96RF0 AP000255.1-201ENST00000610276 676 ntBASIC5.16□□□□□ -1.58
SNX18Q96RF0 VIS1.1-201ENST00000610517 203 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms