Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CTHRC1Q96CG8 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC015799.1-201ENST00000622996 3122 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC020633.1-201ENST00000468439 2247 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC092681.1-201ENST00000297369 291 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 SNORD113-6-201ENST00000363345 75 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 RNU4-2-201ENST00000365668 141 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 MIR143-201ENST00000385300 106 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC092745.2-202ENST00000411880 369 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 LINC01881-201ENST00000416103 412 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC079355.1-201ENST00000421770 223 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 TNPO1P1-201ENST00000423641 1138 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AL121776.1-201ENST00000429337 372 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC073465.2-201ENST00000440938 498 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 ARL5AP2-201ENST00000444698 533 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC023271.1-201ENST00000445936 1090 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 RPL31P44-201ENST00000447680 377 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 RPL7P48-201ENST00000461513 746 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC110749.1-201ENST00000462007 357 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 MRPS33P3-201ENST00000513456 322 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 NDUFB4P12-201ENST00000513465 390 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 FABP5P12-201ENST00000515543 389 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AL356057.1-201ENST00000533798 831 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC010487.1-201ENST00000594408 1172 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC104695.2-201ENST00000605056 775 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC018638.7-201ENST00000605836 1114 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AL118522.2-201ENST00000616045 615 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 VN1R7P-201ENST00000619242 903 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AL603755.1-201ENST00000619504 163 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 MIR6886-201ENST00000619864 61 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC007490.1-201ENST00000624321 703 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC016745.2-201ENST00000608834 3443 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC079097.1-201ENST00000512187 1399 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC087516.1-201ENST00000561236 2428 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 AC000367.1-201ENST00000452711 1766 ntBASIC5.14□□□□□ -1.59
CTHRC1Q96CG8 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AC100871.1-201ENST00000507871 1456 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 CCT8P1-201ENST00000413611 1657 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms