Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC6.25□□□□□ -1.41
ERCC4Q92889 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.25□□□□□ -1.41
ERCC4Q92889 AC006335.2-201ENST00000437993 330 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 AC073465.2-201ENST00000440938 498 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC4Q92889 AC073648.4-201ENST00000442655 781 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.25□□□□□ -1.41
ERCC4Q92889 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC6.25□□□□□ -1.41
ERCC4Q92889 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC4Q92889 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC4Q92889 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.25□□□□□ -1.41
ERCC4Q92889 NXT1P1-201ENST00000458481 316 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 RPS4XP12-201ENST00000461747 709 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 NDUFA5P5-201ENST00000468361 342 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.25□□□□□ -1.41
ERCC4Q92889 RPS17P15-201ENST00000475609 349 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 RPL5P22-201ENST00000480199 884 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC6.25□□□□□ -1.41
ERCC4Q92889 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC6.25□□□□□ -1.41
ERCC4Q92889 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.25□□□□□ -1.41
ERCC4Q92889 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
ERCC4Q92889 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.25□□□□□ -1.41
ERCC4Q92889 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.25□□□□□ -1.41
ERCC4Q92889 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.25□□□□□ -1.41
ERCC4Q92889 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.25□□□□□ -1.41
ERCC4Q92889 AL354943.1-201ENST00000572103 781 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.25□□□□□ -1.41
ERCC4Q92889 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
ERCC4Q92889 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.25□□□□□ -1.41
ERCC4Q92889 MIR4260-201ENST00000583107 67 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 AC015688.2-201ENST00000584523 262 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 AP000769.2-201ENST00000602344 396 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.25□□□□□ -1.41
ERCC4Q92889 AL021707.7-201ENST00000607991 416 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 AL139124.1-201ENST00000609123 421 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 AC009237.15-201ENST00000610252 501 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 AL162574.1-201ENST00000615702 950 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 AL603755.1-201ENST00000619504 163 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.25□□□□□ -1.41
ERCC4Q92889 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC4Q92889 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
ERCC4Q92889 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC4Q92889 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.25□□□□□ -1.41
ERCC4Q92889 AC026523.2-201ENST00000625039 7739 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
ERCC4Q92889 CDC27P2-201ENST00000425026 1922 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC6.25□□□□□ -1.41
ERCC4Q92889 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC4Q92889 MTCO1P18-201ENST00000455518 1419 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 DDX18P5-201ENST00000534547 1306 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
ERCC4Q92889 SRRM1P3-201ENST00000426911 2678 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
ERCC4Q92889 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ERCC4Q92889 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
ERCC4Q92889 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.24□□□□□ -1.41
ERCC4Q92889 SOCS5P3-201ENST00000425115 1576 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ERCC4Q92889 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ERCC4Q92889 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ERCC4Q92889 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ERCC4Q92889 RNU1-87P-201ENST00000363727 170 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 SNORD116-9-201ENST00000384000 95 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 SNORD116-3-201ENST00000384287 95 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 SNORD116-7-201ENST00000384404 95 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 SNORD116-5-201ENST00000384462 95 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 ATP5HP3-201ENST00000396994 486 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC6.24□□□□□ -1.41
ERCC4Q92889 RAP1BP1-201ENST00000412709 553 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC6.24□□□□□ -1.41
ERCC4Q92889 MTND4P22-201ENST00000413116 1169 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 SEPT2P1-201ENST00000419651 180 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 AC066692.1-201ENST00000421721 457 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC6.24□□□□□ -1.41
ERCC4Q92889 HSPE1P16-201ENST00000426640 348 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 RPL7P56-201ENST00000429441 717 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.24□□□□□ -1.41
ERCC4Q92889 KCTD9P1-201ENST00000430462 1167 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 AC005345.1-201ENST00000431868 217 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 RPL12P11-201ENST00000439970 501 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 MTCYBP42-201ENST00000444653 1130 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.24□□□□□ -1.41
ERCC4Q92889 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.24□□□□□ -1.41
ERCC4Q92889 AC073387.1-201ENST00000453261 709 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 HLA-DPA3-207ENST00000454398 229 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 RPL7P32-201ENST00000457119 744 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
ERCC4Q92889 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.24□□□□□ -1.41
ERCC4Q92889 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.24□□□□□ -1.41
ERCC4Q92889 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.24□□□□□ -1.41
ERCC4Q92889 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.24□□□□□ -1.41
ERCC4Q92889 PMS2P3-207ENST00000529061 717 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC6.24□□□□□ -1.41
ERCC4Q92889 LYZ-203ENST00000549690 669 ntTSL 2 BASIC6.24□□□□□ -1.41
ERCC4Q92889 AL359219.2-201ENST00000555184 348 ntBASIC6.24□□□□□ -1.41
ERCC4Q92889 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.24□□□□□ -1.41
ERCC4Q92889 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.24□□□□□ -1.41
ERCC4Q92889 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms