Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 AC007686.1-201ENST00000488511 463 ntBASIC5.35□□□□□ -1.55
HMGB4Q8WW32 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.35□□□□□ -1.55
HMGB4Q8WW32 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.35□□□□□ -1.55
HMGB4Q8WW32 OR5AZ1P-201ENST00000527448 943 ntBASIC5.35□□□□□ -1.55
HMGB4Q8WW32 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 AC016839.1-201ENST00000578162 867 ntBASIC5.35□□□□□ -1.55
HMGB4Q8WW32 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 AP001357.1-201ENST00000586304 1053 ntBASIC5.35□□□□□ -1.55
HMGB4Q8WW32 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 Z82195.1-201ENST00000604558 398 ntBASIC5.35□□□□□ -1.55
HMGB4Q8WW32 AC087783.2-201ENST00000605070 562 ntBASIC5.35□□□□□ -1.55
HMGB4Q8WW32 AC139713.2-210ENST00000641741 992 ntBASIC5.35□□□□□ -1.55
HMGB4Q8WW32 AC073869.8-201ENST00000641806 335 ntBASIC5.35□□□□□ -1.55
HMGB4Q8WW32 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
HMGB4Q8WW32 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AC109446.4-201ENST00000623235 2755 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 SMG1P7-201ENST00000565246 2704 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AP005432.1-201ENST00000580891 3485 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 SNURFL-201ENST00000309296 343 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 RN7SKP104-201ENST00000362605 328 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 SNORD56.6-201ENST00000384569 71 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 OSTCP5-201ENST00000425293 453 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AP000936.3-201ENST00000438127 255 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AL133244.1-201ENST00000456007 258 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 RNU7-27P-201ENST00000459281 62 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AC012123.2-201ENST00000485809 248 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 RPS17P5-201ENST00000498293 408 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AP000619.2-201ENST00000546014 969 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 PCNPP1-201ENST00000552501 511 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AL132857.1-201ENST00000555180 708 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 MTCYBP23-201ENST00000558717 1102 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AL445435.1-201ENST00000604232 665 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AC005252.1-201ENST00000604518 1063 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AC093799.2-201ENST00000610062 578 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AC104985.3-201ENST00000623479 597 ntBASIC5.34□□□□□ -1.55
HMGB4Q8WW32 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.34□□□□□ -1.55
HMGB4Q8WW32 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HMGB4Q8WW32 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HMGB4Q8WW32 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms