Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RN7SL176P-201ENST00000580352 264 ntBASIC5.59□□□□□ -1.51
SNED1Q8TER0 AC107993.1-201ENST00000591343 684 ntBASIC5.59□□□□□ -1.51
SNED1Q8TER0 AL391001.1-201ENST00000602747 715 ntBASIC5.59□□□□□ -1.51
SNED1Q8TER0 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNED1Q8TER0 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.59□□□□□ -1.51
SNED1Q8TER0 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SNED1Q8TER0 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SNED1Q8TER0 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SNED1Q8TER0 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.59□□□□□ -1.52
SNED1Q8TER0 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNED1Q8TER0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNED1Q8TER0 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNED1Q8TER0 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
SNED1Q8TER0 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNED1Q8TER0 OR5P1P-201ENST00000299512 925 ntBASIC5.58□□□□□ -1.52
SNED1Q8TER0 AL359837.1-201ENST00000381357 287 ntBASIC5.58□□□□□ -1.52
SNED1Q8TER0 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.58□□□□□ -1.52
SNED1Q8TER0 RNU6-233P-201ENST00000410845 141 ntBASIC5.58□□□□□ -1.52
SNED1Q8TER0 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.58□□□□□ -1.52
SNED1Q8TER0 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.58□□□□□ -1.52
SNED1Q8TER0 AC013410.1-201ENST00000436223 1232 ntBASIC5.58□□□□□ -1.52
SNED1Q8TER0 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.58□□□□□ -1.52
SNED1Q8TER0 snoU13.22-201ENST00000459428 104 ntBASIC5.58□□□□□ -1.52
SNED1Q8TER0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.58□□□□□ -1.52
SNED1Q8TER0 MIR2116-201ENST00000517221 80 ntBASIC5.58□□□□□ -1.52
SNED1Q8TER0 OR8A2P-201ENST00000528631 952 ntBASIC5.58□□□□□ -1.52
SNED1Q8TER0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.58□□□□□ -1.52
SNED1Q8TER0 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.58□□□□□ -1.52
SNED1Q8TER0 AC009120.7-201ENST00000623452 780 ntBASIC5.58□□□□□ -1.52
SNED1Q8TER0 AC112200.1-201ENST00000625015 234 ntBASIC5.58□□□□□ -1.52
SNED1Q8TER0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNED1Q8TER0 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNED1Q8TER0 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.58□□□□□ -1.52
SNED1Q8TER0 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNED1Q8TER0 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNED1Q8TER0 CPHL1P-201ENST00000461341 3407 ntBASIC5.58□□□□□ -1.52
SNED1Q8TER0 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SNED1Q8TER0 AC011755.1-201ENST00000623763 2049 ntBASIC5.58□□□□□ -1.52
SNED1Q8TER0 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.58□□□□□ -1.52
SNED1Q8TER0 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNED1Q8TER0 NOL8P1-201ENST00000508336 3529 ntBASIC5.58□□□□□ -1.52
SNED1Q8TER0 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
SNED1Q8TER0 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.57□□□□□ -1.52
SNED1Q8TER0 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNED1Q8TER0 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SNED1Q8TER0 MIR372-201ENST00000362225 67 ntBASIC5.57□□□□□ -1.52
SNED1Q8TER0 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.57□□□□□ -1.52
SNED1Q8TER0 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNED1Q8TER0 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.57□□□□□ -1.52
SNED1Q8TER0 AC114982.2-201ENST00000461396 358 ntBASIC5.57□□□□□ -1.52
SNED1Q8TER0 RPS26P24-201ENST00000497656 331 ntBASIC5.57□□□□□ -1.52
SNED1Q8TER0 SNORA67.7-201ENST00000516664 135 ntBASIC5.57□□□□□ -1.52
SNED1Q8TER0 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.57□□□□□ -1.52
SNED1Q8TER0 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.57□□□□□ -1.52
SNED1Q8TER0 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.57□□□□□ -1.52
SNED1Q8TER0 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.57□□□□□ -1.52
SNED1Q8TER0 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.57□□□□□ -1.52
SNED1Q8TER0 AC105036.1-201ENST00000566222 271 ntBASIC5.57□□□□□ -1.52
SNED1Q8TER0 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.57□□□□□ -1.52
SNED1Q8TER0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.57□□□□□ -1.52
SNED1Q8TER0 AC023043.4-201ENST00000612081 449 ntBASIC5.57□□□□□ -1.52
SNED1Q8TER0 AC015914.2-201ENST00000618167 288 ntBASIC5.57□□□□□ -1.52
SNED1Q8TER0 AC005899.7-201ENST00000618199 588 ntBASIC5.57□□□□□ -1.52
SNED1Q8TER0 AC010809.3-201ENST00000621310 641 ntBASIC5.57□□□□□ -1.52
SNED1Q8TER0 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNED1Q8TER0 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.57□□□□□ -1.52
SNED1Q8TER0 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNED1Q8TER0 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNED1Q8TER0 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNED1Q8TER0 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNED1Q8TER0 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNED1Q8TER0 AL592182.3-201ENST00000642132 3304 ntBASIC5.57□□□□□ -1.52
SNED1Q8TER0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNED1Q8TER0 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNED1Q8TER0 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNED1Q8TER0 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNED1Q8TER0 SCARNA15-201ENST00000607520 4325 ntBASIC5.57□□□□□ -1.52
SNED1Q8TER0 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNED1Q8TER0 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNED1Q8TER0 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SNED1Q8TER0 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNED1Q8TER0 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNED1Q8TER0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNED1Q8TER0 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SNED1Q8TER0 RNA5SP187-201ENST00000384400 119 ntBASIC5.57□□□□□ -1.52
SNED1Q8TER0 RPS27AP11-201ENST00000402798 447 ntBASIC5.57□□□□□ -1.52
SNED1Q8TER0 AP000580.1-201ENST00000404439 358 ntBASIC5.57□□□□□ -1.52
SNED1Q8TER0 RNA5SP44-201ENST00000410446 133 ntBASIC5.57□□□□□ -1.52
SNED1Q8TER0 AL132765.1-201ENST00000434165 553 ntBASIC5.57□□□□□ -1.52
SNED1Q8TER0 AL157385.1-201ENST00000446973 268 ntBASIC5.57□□□□□ -1.52
SNED1Q8TER0 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.57□□□□□ -1.52
SNED1Q8TER0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.57□□□□□ -1.52
SNED1Q8TER0 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNED1Q8TER0 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.57□□□□□ -1.52
SNED1Q8TER0 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.57□□□□□ -1.52
SNED1Q8TER0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.57□□□□□ -1.52
SNED1Q8TER0 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
SNED1Q8TER0 CYCSP40-201ENST00000575927 294 ntBASIC5.57□□□□□ -1.52
SNED1Q8TER0 AC023389.2-201ENST00000580031 955 ntBASIC5.57□□□□□ -1.52
SNED1Q8TER0 AC020634.1-201ENST00000608701 549 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms