Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.69□□□□□ -1.5
RTL9Q8NET4 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.69□□□□□ -1.5
RTL9Q8NET4 AC007224.1-201ENST00000564410 144 ntBASIC5.69□□□□□ -1.5
RTL9Q8NET4 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.69□□□□□ -1.5
RTL9Q8NET4 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.69□□□□□ -1.5
RTL9Q8NET4 AL392048.1-201ENST00000613946 534 ntBASIC5.69□□□□□ -1.5
RTL9Q8NET4 AP005019.3-201ENST00000620418 560 ntBASIC5.69□□□□□ -1.5
RTL9Q8NET4 AL161637.1-201ENST00000622380 412 ntBASIC5.69□□□□□ -1.5
RTL9Q8NET4 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTL9Q8NET4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTL9Q8NET4 AC005261.2-201ENST00000593427 4258 ntBASIC5.69□□□□□ -1.5
RTL9Q8NET4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTL9Q8NET4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTL9Q8NET4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RTL9Q8NET4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.69□□□□□ -1.5
RTL9Q8NET4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RTL9Q8NET4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTL9Q8NET4 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.68□□□□□ -1.5
RTL9Q8NET4 RN7SKP263-201ENST00000411194 309 ntBASIC5.68□□□□□ -1.5
RTL9Q8NET4 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.68□□□□□ -1.5
RTL9Q8NET4 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.68□□□□□ -1.5
RTL9Q8NET4 HMGN2P27-201ENST00000427352 270 ntBASIC5.68□□□□□ -1.5
RTL9Q8NET4 RPS27AP12-201ENST00000429552 465 ntBASIC5.68□□□□□ -1.5
RTL9Q8NET4 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.68□□□□□ -1.5
RTL9Q8NET4 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.68□□□□□ -1.5
RTL9Q8NET4 GTF3AP5-201ENST00000442645 697 ntBASIC5.68□□□□□ -1.5
RTL9Q8NET4 ISCUP1-201ENST00000454451 448 ntBASIC5.68□□□□□ -1.5
RTL9Q8NET4 RPL7P32-201ENST00000457119 744 ntBASIC5.68□□□□□ -1.5
RTL9Q8NET4 CYCSP34-201ENST00000458172 304 ntBASIC5.68□□□□□ -1.5
RTL9Q8NET4 AC098799.3-201ENST00000506095 438 ntBASIC5.68□□□□□ -1.5
RTL9Q8NET4 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RTL9Q8NET4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.68□□□□□ -1.5
RTL9Q8NET4 CYCSP29-201ENST00000533731 318 ntBASIC5.68□□□□□ -1.5
RTL9Q8NET4 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.68□□□□□ -1.5
RTL9Q8NET4 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.68□□□□□ -1.5
RTL9Q8NET4 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.68□□□□□ -1.5
RTL9Q8NET4 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.68□□□□□ -1.5
RTL9Q8NET4 AC114781.5-201ENST00000615297 108 ntBASIC5.68□□□□□ -1.5
RTL9Q8NET4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RTL9Q8NET4 AL445487.1-201ENST00000415694 1580 ntBASIC5.68□□□□□ -1.5
RTL9Q8NET4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTL9Q8NET4 UGT2B26P-201ENST00000508672 1613 ntBASIC5.68□□□□□ -1.5
RTL9Q8NET4 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RTL9Q8NET4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTL9Q8NET4 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RTL9Q8NET4 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTL9Q8NET4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RTL9Q8NET4 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RTL9Q8NET4 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RTL9Q8NET4 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RTL9Q8NET4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.67□□□□□ -1.5
RTL9Q8NET4 AC006484.1-201ENST00000435086 1884 ntBASIC5.67□□□□□ -1.5
RTL9Q8NET4 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.67□□□□□ -1.5
RTL9Q8NET4 AL935212.3-201ENST00000450729 284 ntBASIC5.67□□□□□ -1.5
RTL9Q8NET4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.67□□□□□ -1.5
RTL9Q8NET4 RPL21P126-201ENST00000470049 478 ntBASIC5.67□□□□□ -1.5
RTL9Q8NET4 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.67□□□□□ -1.5
RTL9Q8NET4 AC106806.2-201ENST00000509365 500 ntBASIC5.67□□□□□ -1.5
RTL9Q8NET4 IGLVIV-65-201ENST00000517313 360 ntBASIC5.67□□□□□ -1.5
RTL9Q8NET4 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.67□□□□□ -1.5
RTL9Q8NET4 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RTL9Q8NET4 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.67□□□□□ -1.5
RTL9Q8NET4 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.67□□□□□ -1.5
RTL9Q8NET4 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.67□□□□□ -1.5
RTL9Q8NET4 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RTL9Q8NET4 AP001160.4-201ENST00000596971 382 ntBASIC5.67□□□□□ -1.5
RTL9Q8NET4 AC108467.2-201ENST00000617640 1597 ntBASIC5.67□□□□□ -1.5
RTL9Q8NET4 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RTL9Q8NET4 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.67□□□□□ -1.5
RTL9Q8NET4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RTL9Q8NET4 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RTL9Q8NET4 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RTL9Q8NET4 AL731566.1-201ENST00000620490 1937 ntBASIC5.67□□□□□ -1.5
RTL9Q8NET4 AC097063.1-201ENST00000426714 1797 ntBASIC5.67□□□□□ -1.5
RTL9Q8NET4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RTL9Q8NET4 VN2R3P-201ENST00000422626 1412 ntBASIC5.67□□□□□ -1.5
RTL9Q8NET4 CASC19-206ENST00000641028 1430 ntBASIC5.67□□□□□ -1.5
RTL9Q8NET4 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.67□□□□□ -1.5
RTL9Q8NET4 CDC27P1-201ENST00000445384 715 ntBASIC5.67□□□□□ -1.5
RTL9Q8NET4 MRPL48P1-201ENST00000445390 636 ntBASIC5.67□□□□□ -1.5
RTL9Q8NET4 AL157385.1-201ENST00000446973 268 ntBASIC5.67□□□□□ -1.5
RTL9Q8NET4 AC020890.1-201ENST00000491837 504 ntBASIC5.67□□□□□ -1.5
RTL9Q8NET4 AK4P6-201ENST00000505168 528 ntBASIC5.67□□□□□ -1.5
RTL9Q8NET4 AL445567.2-201ENST00000618935 498 ntBASIC5.67□□□□□ -1.5
RTL9Q8NET4 CPHL1P-201ENST00000461341 3407 ntBASIC5.66□□□□□ -1.5
RTL9Q8NET4 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RTL9Q8NET4 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RTL9Q8NET4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.66□□□□□ -1.5
RTL9Q8NET4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.66□□□□□ -1.5
RTL9Q8NET4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RTL9Q8NET4 AP000542.2-201ENST00000623199 6179 ntBASIC5.66□□□□□ -1.5
RTL9Q8NET4 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RTL9Q8NET4 MIR134-201ENST00000385258 73 ntBASIC5.66□□□□□ -1.5
RTL9Q8NET4 AP001324.1-201ENST00000428553 399 ntBASIC5.66□□□□□ -1.5
RTL9Q8NET4 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.66□□□□□ -1.5
RTL9Q8NET4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.66□□□□□ -1.5
RTL9Q8NET4 AC004938.1-201ENST00000438468 308 ntBASIC5.66□□□□□ -1.5
RTL9Q8NET4 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.66□□□□□ -1.5
RTL9Q8NET4 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.66□□□□□ -1.5
RTL9Q8NET4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms