Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 PCAT14-202ENST00000627127 3935 ntBASIC6.93□□□□□ -1.3
VPS8Q8N3P4 AL049693.1-201ENST00000402760 611 ntBASIC6.93□□□□□ -1.3
VPS8Q8N3P4 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.93□□□□□ -1.3
VPS8Q8N3P4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 RN7SL385P-201ENST00000468873 276 ntBASIC6.93□□□□□ -1.3
VPS8Q8N3P4 AC090013.1-201ENST00000485147 480 ntBASIC6.93□□□□□ -1.3
VPS8Q8N3P4 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 AC136624.4-201ENST00000573044 370 ntBASIC6.93□□□□□ -1.3
VPS8Q8N3P4 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 Z98200.1-201ENST00000607298 470 ntBASIC6.93□□□□□ -1.3
VPS8Q8N3P4 AC114781.5-201ENST00000615297 108 ntBASIC6.93□□□□□ -1.3
VPS8Q8N3P4 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
VPS8Q8N3P4 AC009951.1-201ENST00000623674 2614 ntBASIC6.92□□□□□ -1.3
VPS8Q8N3P4 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VPS8Q8N3P4 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VPS8Q8N3P4 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC6.92□□□□□ -1.3
VPS8Q8N3P4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VPS8Q8N3P4 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VPS8Q8N3P4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.92□□□□□ -1.3
VPS8Q8N3P4 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.92□□□□□ -1.3
VPS8Q8N3P4 RPL34P6-201ENST00000432390 345 ntBASIC6.92□□□□□ -1.3
VPS8Q8N3P4 AC011998.1-201ENST00000433403 117 ntBASIC6.92□□□□□ -1.3
VPS8Q8N3P4 RPL7P32-201ENST00000457119 744 ntBASIC6.92□□□□□ -1.3
VPS8Q8N3P4 FTH1P2-201ENST00000466086 412 ntBASIC6.92□□□□□ -1.3
VPS8Q8N3P4 AC090151.1-201ENST00000520784 730 ntBASIC6.92□□□□□ -1.3
VPS8Q8N3P4 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.92□□□□□ -1.3
VPS8Q8N3P4 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.92□□□□□ -1.3
VPS8Q8N3P4 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
VPS8Q8N3P4 AC023575.1-201ENST00000580510 358 ntBASIC6.92□□□□□ -1.3
VPS8Q8N3P4 AC125494.2-201ENST00000602431 657 ntBASIC6.92□□□□□ -1.3
VPS8Q8N3P4 CASC19-204ENST00000641001 2055 ntBASIC6.92□□□□□ -1.3
VPS8Q8N3P4 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VPS8Q8N3P4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VPS8Q8N3P4 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VPS8Q8N3P4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.91□□□□□ -1.3
VPS8Q8N3P4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VPS8Q8N3P4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC6.91□□□□□ -1.3
VPS8Q8N3P4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
VPS8Q8N3P4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VPS8Q8N3P4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
VPS8Q8N3P4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VPS8Q8N3P4 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VPS8Q8N3P4 SNORA62-201ENST00000365493 153 ntBASIC6.91□□□□□ -1.3
VPS8Q8N3P4 U3.23-201ENST00000391132 200 ntBASIC6.91□□□□□ -1.3
VPS8Q8N3P4 PEX12P1-201ENST00000400284 1048 ntBASIC6.91□□□□□ -1.3
VPS8Q8N3P4 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VPS8Q8N3P4 TPT1P1-201ENST00000458495 518 ntBASIC6.91□□□□□ -1.3
VPS8Q8N3P4 PGBD4P4-201ENST00000509673 613 ntBASIC6.91□□□□□ -1.3
VPS8Q8N3P4 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
VPS8Q8N3P4 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.91□□□□□ -1.3
VPS8Q8N3P4 AC027455.1-201ENST00000574104 594 ntBASIC6.91□□□□□ -1.3
VPS8Q8N3P4 MIR3138-201ENST00000585238 82 ntBASIC6.91□□□□□ -1.3
VPS8Q8N3P4 AC097505.1-201ENST00000610199 565 ntBASIC6.91□□□□□ -1.3
VPS8Q8N3P4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
VPS8Q8N3P4 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
VPS8Q8N3P4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
VPS8Q8N3P4 AC091905.2-201ENST00000623143 306 ntBASIC6.91□□□□□ -1.3
VPS8Q8N3P4 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VPS8Q8N3P4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC6.91□□□□□ -1.3
VPS8Q8N3P4 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC6.9□□□□□ -1.3
VPS8Q8N3P4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
VPS8Q8N3P4 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
VPS8Q8N3P4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
VPS8Q8N3P4 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
VPS8Q8N3P4 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
VPS8Q8N3P4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
VPS8Q8N3P4 SNORA70.2-201ENST00000364506 135 ntBASIC6.9□□□□□ -1.31
VPS8Q8N3P4 OR6C69P-201ENST00000394268 893 ntBASIC6.9□□□□□ -1.31
VPS8Q8N3P4 ST13P16-201ENST00000401760 781 ntBASIC6.9□□□□□ -1.31
VPS8Q8N3P4 SNORA11F-201ENST00000408237 128 ntBASIC6.9□□□□□ -1.31
VPS8Q8N3P4 COX6CP17-201ENST00000421389 185 ntBASIC6.9□□□□□ -1.31
VPS8Q8N3P4 RSL24D1P6-201ENST00000426934 401 ntBASIC6.9□□□□□ -1.31
VPS8Q8N3P4 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.9□□□□□ -1.31
VPS8Q8N3P4 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.9□□□□□ -1.31
VPS8Q8N3P4 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.9□□□□□ -1.31
VPS8Q8N3P4 RPL35P6-201ENST00000490024 372 ntBASIC6.9□□□□□ -1.31
VPS8Q8N3P4 RNA5SP497-201ENST00000516081 97 ntBASIC6.9□□□□□ -1.31
VPS8Q8N3P4 AC087360.1-201ENST00000518788 616 ntBASIC6.9□□□□□ -1.31
VPS8Q8N3P4 AC138701.1-201ENST00000524329 714 ntBASIC6.9□□□□□ -1.31
VPS8Q8N3P4 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.9□□□□□ -1.31
VPS8Q8N3P4 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.9□□□□□ -1.31
VPS8Q8N3P4 CYCSP28-201ENST00000534284 321 ntBASIC6.9□□□□□ -1.31
VPS8Q8N3P4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC6.9□□□□□ -1.31
VPS8Q8N3P4 AL672167.1-203ENST00000641299 2975 ntBASIC6.9□□□□□ -1.31
VPS8Q8N3P4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC6.9□□□□□ -1.31
VPS8Q8N3P4 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
VPS8Q8N3P4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VPS8Q8N3P4 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
VPS8Q8N3P4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VPS8Q8N3P4 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VPS8Q8N3P4 RNA5SP366-201ENST00000365454 123 ntBASIC6.89□□□□□ -1.31
VPS8Q8N3P4 RNU1-44P-201ENST00000384453 163 ntBASIC6.89□□□□□ -1.31
VPS8Q8N3P4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VPS8Q8N3P4 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC6.89□□□□□ -1.31
VPS8Q8N3P4 BTF3P10-201ENST00000433415 495 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms