Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 MIR4691-201ENST00000583764 85 ntBASIC3.28□□□□□ -1.88
SCXQ7RTU7 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 AC011487.3-201ENST00000593607 453 ntBASIC3.28□□□□□ -1.88
SCXQ7RTU7 AC009237.13-201ENST00000603193 276 ntBASIC3.28□□□□□ -1.88
SCXQ7RTU7 AC017076.1-201ENST00000607613 578 ntBASIC3.28□□□□□ -1.88
SCXQ7RTU7 AP006248.2-201ENST00000623309 592 ntBASIC3.28□□□□□ -1.88
SCXQ7RTU7 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 AC079298.1-201ENST00000625026 1619 ntBASIC3.28□□□□□ -1.88
SCXQ7RTU7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SCXQ7RTU7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SCXQ7RTU7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
SCXQ7RTU7 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SCXQ7RTU7 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SCXQ7RTU7 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SCXQ7RTU7 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SCXQ7RTU7 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SCXQ7RTU7 OR14L1P-202ENST00000641545 3009 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SCXQ7RTU7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SCXQ7RTU7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SCXQ7RTU7 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SCXQ7RTU7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 ERVFRD-3-201ENST00000578561 1617 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SCXQ7RTU7 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 RN7SKP153-201ENST00000365026 316 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 AC013442.1-201ENST00000397347 228 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 AL359643.1-201ENST00000404109 423 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 GAPDHP49-201ENST00000421421 961 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 AC012519.1-201ENST00000424588 610 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SCXQ7RTU7 HSPD1P12-201ENST00000429127 1069 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 FABP7P2-201ENST00000429946 379 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 AL161722.2-201ENST00000434731 981 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 PRPF38AP2-201ENST00000438179 851 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 H2AFZP6-201ENST00000444403 394 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SCXQ7RTU7 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 NDUFS5P3-201ENST00000450668 321 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 AC108161.1-201ENST00000461060 402 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 RN7SL189P-201ENST00000468631 289 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 AC092324.1-201ENST00000468671 324 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 AC007686.1-201ENST00000488511 463 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SCXQ7RTU7 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 CCNHP1-201ENST00000513311 678 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 AC108471.1-201ENST00000513977 287 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 AC006427.1-201ENST00000514359 712 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 RNA5SP303-201ENST00000516192 130 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 IGHV3-63-201ENST00000518422 341 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SCXQ7RTU7 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 NOP10-202ENST00000557912 436 ntTSL 2 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 PDCD6IPP2-207ENST00000566321 1069 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 AC008814.1-201ENST00000603797 406 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 AC087385.3-201ENST00000620477 187 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 AC067852.7-201ENST00000623270 535 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 AC112694.2-201ENST00000623697 768 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 AC073869.10-201ENST00000642016 354 ntBASIC3.27□□□□□ -1.89
SCXQ7RTU7 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
SCXQ7RTU7 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SCXQ7RTU7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
SCXQ7RTU7 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SCXQ7RTU7 AC092435.4-201ENST00000623012 4159 ntBASIC3.26□□□□□ -1.89
SCXQ7RTU7 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms