Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS13CQ709C8 OR11H4-201ENST00000315409 1082 ntBASIC3.58□□□□□ -1.84
VPS13CQ709C8 RNA5SP453-201ENST00000362503 119 ntBASIC3.58□□□□□ -1.84
VPS13CQ709C8 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS13CQ709C8 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS13CQ709C8 AC021876.1-201ENST00000425959 359 ntBASIC3.58□□□□□ -1.84
VPS13CQ709C8 AC236972.1-201ENST00000433225 199 ntBASIC3.58□□□□□ -1.84
VPS13CQ709C8 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS13CQ709C8 RN7SKP13-201ENST00000515933 244 ntBASIC3.58□□□□□ -1.84
VPS13CQ709C8 AC010201.1-201ENST00000605051 540 ntBASIC3.58□□□□□ -1.84
VPS13CQ709C8 AC015804.1-201ENST00000622935 435 ntBASIC3.58□□□□□ -1.84
VPS13CQ709C8 FP236240.3-201ENST00000623061 327 ntBASIC3.58□□□□□ -1.84
VPS13CQ709C8 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
VPS13CQ709C8 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
VPS13CQ709C8 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
VPS13CQ709C8 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS13CQ709C8 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS13CQ709C8 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS13CQ709C8 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
VPS13CQ709C8 HSPE1P12-201ENST00000412576 301 ntBASIC3.57□□□□□ -1.84
VPS13CQ709C8 BX679664.2-201ENST00000439282 283 ntBASIC3.57□□□□□ -1.84
VPS13CQ709C8 PTMAP3-201ENST00000447474 330 ntBASIC3.57□□□□□ -1.84
VPS13CQ709C8 PRELID3BP6-201ENST00000503839 571 ntBASIC3.57□□□□□ -1.84
VPS13CQ709C8 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS13CQ709C8 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS13CQ709C8 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS13CQ709C8 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS13CQ709C8 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS13CQ709C8 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC3.57□□□□□ -1.84
VPS13CQ709C8 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS13CQ709C8 AC007159.1-201ENST00000566529 4706 ntBASIC3.57□□□□□ -1.84
VPS13CQ709C8 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS13CQ709C8 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
VPS13CQ709C8 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS13CQ709C8 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS13CQ709C8 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS13CQ709C8 MIR491-201ENST00000384877 84 ntBASIC3.57□□□□□ -1.84
VPS13CQ709C8 NPM1P26-201ENST00000426339 738 ntBASIC3.57□□□□□ -1.84
VPS13CQ709C8 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
VPS13CQ709C8 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS13CQ709C8 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS13CQ709C8 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS13CQ709C8 AP005019.3-201ENST00000620418 560 ntBASIC3.57□□□□□ -1.84
VPS13CQ709C8 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS13CQ709C8 AL355488.2-201ENST00000609909 2850 ntBASIC3.57□□□□□ -1.84
VPS13CQ709C8 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS13CQ709C8 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
VPS13CQ709C8 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS13CQ709C8 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS13CQ709C8 RNU4-64P-201ENST00000410795 131 ntBASIC3.57□□□□□ -1.84
VPS13CQ709C8 NPM1P36-201ENST00000415681 835 ntBASIC3.57□□□□□ -1.84
VPS13CQ709C8 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS13CQ709C8 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS13CQ709C8 AC090312.1-201ENST00000580637 348 ntBASIC3.57□□□□□ -1.84
VPS13CQ709C8 AL138721.1-201ENST00000616756 179 ntBASIC3.57□□□□□ -1.84
VPS13CQ709C8 CR392039.5-201ENST00000623201 510 ntBASIC3.57□□□□□ -1.84
VPS13CQ709C8 AC008013.2-202ENST00000637965 364 ntBASIC3.57□□□□□ -1.84
VPS13CQ709C8 FP325313.1-201ENST00000638228 703 ntBASIC3.57□□□□□ -1.84
VPS13CQ709C8 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS13CQ709C8 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS13CQ709C8 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS13CQ709C8 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS13CQ709C8 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS13CQ709C8 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS13CQ709C8 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
VPS13CQ709C8 AL031119.1-201ENST00000404707 1879 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS13CQ709C8 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS13CQ709C8 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VPS13CQ709C8 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VPS13CQ709C8 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VPS13CQ709C8 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS13CQ709C8 ATP5G1P3-201ENST00000463301 410 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 GTF2IP22-201ENST00000554443 182 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VPS13CQ709C8 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
VPS13CQ709C8 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
VPS13CQ709C8 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS13CQ709C8 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS13CQ709C8 AC092376.2-201ENST00000622621 4116 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 MIR34B-201ENST00000385076 84 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 AL139095.1-201ENST00000404326 391 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 AC096664.2-201ENST00000411843 406 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VPS13CQ709C8 RPS20P21-201ENST00000466859 343 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 SETP6-201ENST00000479329 568 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 AC006499.5-201ENST00000505037 514 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 DUX4L52-201ENST00000549363 777 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS13CQ709C8 MIR5684-201ENST00000585074 65 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 AC005255.1-201ENST00000593748 216 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 AC007342.8-201ENST00000623278 678 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS13CQ709C8 EOGT-210ENST00000615922 1931 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
VPS13CQ709C8 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
VPS13CQ709C8 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS13CQ709C8 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VPS13CQ709C8 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS13CQ709C8 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms