Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 RN7SKP285-201ENST00000410137 318 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RNF43Q68DV7 MTND2P23-201ENST00000422990 651 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 LYPLA1P1-201ENST00000434514 622 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 RPL7P36-201ENST00000444633 681 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 FAR2P1-206ENST00000449736 709 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RNF43Q68DV7 OR6K1P-201ENST00000456766 971 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 RN7SL254P-201ENST00000460609 284 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 AC105252.1-201ENST00000503089 286 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RNF43Q68DV7 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 AP005639.1-201ENST00000526939 192 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 CYP2C60P-201ENST00000566088 139 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF43Q68DV7 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 AC005261.5-201ENST00000596280 355 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 AC063977.5-201ENST00000601044 974 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 AC091834.1-201ENST00000614543 472 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 SNX18P12-201ENST00000624821 759 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 AF001550.2-201ENST00000636643 217 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 LINC02495-203ENST00000636704 242 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RNF43Q68DV7 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF43Q68DV7 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF43Q68DV7 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF43Q68DV7 OR10AB1P-202ENST00000641219 1686 ntBASIC6.68□□□□□ -1.34
RNF43Q68DV7 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RNF43Q68DV7 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.68□□□□□ -1.34
RNF43Q68DV7 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.67□□□□□ -1.34
RNF43Q68DV7 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.67□□□□□ -1.34
RNF43Q68DV7 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RNF43Q68DV7 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
RNF43Q68DV7 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
RNF43Q68DV7 AC011455.2-201ENST00000599320 3336 ntBASIC6.67□□□□□ -1.34
RNF43Q68DV7 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.67□□□□□ -1.34
RNF43Q68DV7 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.67□□□□□ -1.34
RNF43Q68DV7 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
RNF43Q68DV7 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
RNF43Q68DV7 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RNF43Q68DV7 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RNF43Q68DV7 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.67□□□□□ -1.34
RNF43Q68DV7 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.67□□□□□ -1.34
RNF43Q68DV7 AC011369.2-201ENST00000624423 1567 ntBASIC6.67□□□□□ -1.34
RNF43Q68DV7 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RNF43Q68DV7 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
RNF43Q68DV7 AL360271.1-201ENST00000395679 510 ntBASIC6.67□□□□□ -1.34
RNF43Q68DV7 GSTA12P-201ENST00000402398 508 ntBASIC6.67□□□□□ -1.34
RNF43Q68DV7 NCSTNP1-201ENST00000406229 144 ntBASIC6.67□□□□□ -1.34
RNF43Q68DV7 RN7SKP229-201ENST00000410465 302 ntBASIC6.67□□□□□ -1.34
RNF43Q68DV7 TPT1P2-201ENST00000413105 503 ntBASIC6.67□□□□□ -1.34
RNF43Q68DV7 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.67□□□□□ -1.34
RNF43Q68DV7 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.67□□□□□ -1.34
RNF43Q68DV7 RPL21P111-201ENST00000418453 477 ntBASIC6.67□□□□□ -1.34
RNF43Q68DV7 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.67□□□□□ -1.34
RNF43Q68DV7 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC6.67□□□□□ -1.34
RNF43Q68DV7 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RNF43Q68DV7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC6.67□□□□□ -1.34
RNF43Q68DV7 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.67□□□□□ -1.34
RNF43Q68DV7 MTND4LP10-201ENST00000435146 291 ntBASIC6.67□□□□□ -1.34
RNF43Q68DV7 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.67□□□□□ -1.34
RNF43Q68DV7 OR6C5P-201ENST00000452388 923 ntBASIC6.67□□□□□ -1.34
RNF43Q68DV7 RNU7-140P-201ENST00000459546 60 ntBASIC6.67□□□□□ -1.34
RNF43Q68DV7 AC074386.1-201ENST00000476560 767 ntBASIC6.67□□□□□ -1.34
RNF43Q68DV7 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.67□□□□□ -1.34
RNF43Q68DV7 AHI1-208ENST00000488690 712 ntTSL 5 BASIC6.67□□□□□ -1.34
RNF43Q68DV7 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.67□□□□□ -1.34
RNF43Q68DV7 Y_RNA.675-201ENST00000516389 149 ntBASIC6.67□□□□□ -1.34
RNF43Q68DV7 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.67□□□□□ -1.34
RNF43Q68DV7 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.67□□□□□ -1.34
RNF43Q68DV7 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms