Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LTBQ06643 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LTBQ06643 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LTBQ06643 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.87□□□□□ -1.63
LTBQ06643 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LTBQ06643 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LTBQ06643 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LTBQ06643 RNU5B-4P-201ENST00000363508 111 ntBASIC4.87□□□□□ -1.63
LTBQ06643 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LTBQ06643 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LTBQ06643 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.87□□□□□ -1.63
LTBQ06643 AC234772.1-201ENST00000377927 937 ntBASIC4.87□□□□□ -1.63
LTBQ06643 RNU6-468P-201ENST00000384003 109 ntBASIC4.87□□□□□ -1.63
LTBQ06643 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LTBQ06643 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LTBQ06643 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
LTBQ06643 SNORA79B-201ENST00000410557 148 ntBASIC4.87□□□□□ -1.63
LTBQ06643 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.87□□□□□ -1.63
LTBQ06643 RPL26P29-201ENST00000415623 438 ntBASIC4.87□□□□□ -1.63
LTBQ06643 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LTBQ06643 KRR1P1-201ENST00000419430 803 ntBASIC4.87□□□□□ -1.63
LTBQ06643 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LTBQ06643 RPL7AP49-201ENST00000429522 581 ntBASIC4.87□□□□□ -1.63
LTBQ06643 AL591438.1-201ENST00000433508 581 ntBASIC4.87□□□□□ -1.63
LTBQ06643 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.87□□□□□ -1.63
LTBQ06643 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.87□□□□□ -1.63
LTBQ06643 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.87□□□□□ -1.63
LTBQ06643 AC091153.1-201ENST00000466297 402 ntBASIC4.87□□□□□ -1.63
LTBQ06643 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.87□□□□□ -1.63
LTBQ06643 RPS17P11-201ENST00000474297 293 ntBASIC4.87□□□□□ -1.63
LTBQ06643 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.87□□□□□ -1.63
LTBQ06643 AC058823.1-201ENST00000485315 474 ntBASIC4.87□□□□□ -1.63
LTBQ06643 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.87□□□□□ -1.63
LTBQ06643 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.87□□□□□ -1.63
LTBQ06643 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.87□□□□□ -1.63
LTBQ06643 HPRT1P1-201ENST00000509498 657 ntBASIC4.87□□□□□ -1.63
LTBQ06643 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.87□□□□□ -1.63
LTBQ06643 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.87□□□□□ -1.63
LTBQ06643 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.87□□□□□ -1.63
LTBQ06643 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.87□□□□□ -1.63
LTBQ06643 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.87□□□□□ -1.63
LTBQ06643 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.87□□□□□ -1.63
LTBQ06643 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.87□□□□□ -1.63
LTBQ06643 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LTBQ06643 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.87□□□□□ -1.63
LTBQ06643 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.87□□□□□ -1.63
LTBQ06643 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.87□□□□□ -1.63
LTBQ06643 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.87□□□□□ -1.63
LTBQ06643 AC025918.2-201ENST00000558683 763 ntBASIC4.87□□□□□ -1.63
LTBQ06643 NMNAT1P5-201ENST00000559657 841 ntBASIC4.87□□□□□ -1.63
LTBQ06643 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.87□□□□□ -1.63
LTBQ06643 AC009097.3-201ENST00000563557 1018 ntBASIC4.87□□□□□ -1.63
LTBQ06643 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.87□□□□□ -1.63
LTBQ06643 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.87□□□□□ -1.63
LTBQ06643 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.87□□□□□ -1.63
LTBQ06643 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.87□□□□□ -1.63
LTBQ06643 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.87□□□□□ -1.63
LTBQ06643 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.87□□□□□ -1.63
LTBQ06643 MTCO3P22-201ENST00000603219 784 ntBASIC4.87□□□□□ -1.63
LTBQ06643 Z94722.1-201ENST00000604328 474 ntBASIC4.87□□□□□ -1.63
LTBQ06643 AC099785.1-201ENST00000605697 437 ntBASIC4.87□□□□□ -1.63
LTBQ06643 AC010245.2-201ENST00000606908 1167 ntBASIC4.87□□□□□ -1.63
LTBQ06643 FRG1EP-201ENST00000634469 770 ntBASIC4.87□□□□□ -1.63
LTBQ06643 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.87□□□□□ -1.63
LTBQ06643 AL355578.1-201ENST00000607405 1328 ntBASIC4.87□□□□□ -1.63
LTBQ06643 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LTBQ06643 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
LTBQ06643 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LTBQ06643 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
LTBQ06643 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LTBQ06643 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LTBQ06643 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.86□□□□□ -1.63
LTBQ06643 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LTBQ06643 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
LTBQ06643 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
LTBQ06643 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LTBQ06643 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
LTBQ06643 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LTBQ06643 AC010132.2-201ENST00000295493 1043 ntBASIC4.86□□□□□ -1.63
LTBQ06643 RPL23P2-201ENST00000320371 421 ntBASIC4.86□□□□□ -1.63
LTBQ06643 RNA5SP319-201ENST00000362768 119 ntBASIC4.86□□□□□ -1.63
LTBQ06643 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.86□□□□□ -1.63
LTBQ06643 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LTBQ06643 RNU6-207P-201ENST00000384137 107 ntBASIC4.86□□□□□ -1.63
LTBQ06643 RNU6-481P-201ENST00000384194 107 ntBASIC4.86□□□□□ -1.63
LTBQ06643 RNU6-906P-201ENST00000384700 70 ntBASIC4.86□□□□□ -1.63
LTBQ06643 RNA5SP241-201ENST00000391326 114 ntBASIC4.86□□□□□ -1.63
LTBQ06643 RPL5P19-201ENST00000404228 893 ntBASIC4.86□□□□□ -1.63
LTBQ06643 OR4K12P-201ENST00000406538 961 ntBASIC4.86□□□□□ -1.63
LTBQ06643 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.86□□□□□ -1.63
LTBQ06643 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.86□□□□□ -1.63
LTBQ06643 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.86□□□□□ -1.63
LTBQ06643 AL606490.7-201ENST00000433136 191 ntBASIC4.86□□□□□ -1.63
LTBQ06643 RPS7P2-201ENST00000435134 607 ntBASIC4.86□□□□□ -1.63
LTBQ06643 FABP5P3-201ENST00000437960 408 ntBASIC4.86□□□□□ -1.63
LTBQ06643 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.86□□□□□ -1.63
LTBQ06643 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.86□□□□□ -1.63
LTBQ06643 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.86□□□□□ -1.63
LTBQ06643 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.86□□□□□ -1.63
LTBQ06643 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms