Protein–RNA interactions for Protein: P78317

RNF4, E3 ubiquitin-protein ligase RNF4, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4P78317 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC6.05□□□□□ -1.44
RNF4P78317 RNU6-507P-201ENST00000516045 100 ntBASIC6.05□□□□□ -1.44
RNF4P78317 RNU6-1261P-201ENST00000517194 104 ntBASIC6.05□□□□□ -1.44
RNF4P78317 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
RNF4P78317 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF4P78317 IGLV3-6-201ENST00000523937 250 ntBASIC6.05□□□□□ -1.44
RNF4P78317 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC6.05□□□□□ -1.44
RNF4P78317 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
RNF4P78317 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC6.05□□□□□ -1.44
RNF4P78317 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC6.05□□□□□ -1.44
RNF4P78317 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC6.05□□□□□ -1.44
RNF4P78317 AC138207.8-204ENST00000579588 527 ntBASIC6.05□□□□□ -1.44
RNF4P78317 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.05□□□□□ -1.44
RNF4P78317 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.05□□□□□ -1.44
RNF4P78317 AC079395.2-201ENST00000610982 737 ntBASIC6.05□□□□□ -1.44
RNF4P78317 AL359535.1-201ENST00000612100 1087 ntBASIC6.05□□□□□ -1.44
RNF4P78317 OR8G7P-201ENST00000616658 848 ntBASIC6.05□□□□□ -1.44
RNF4P78317 MIR6085-201ENST00000618314 110 ntBASIC6.05□□□□□ -1.44
RNF4P78317 AL158209.2-201ENST00000619266 216 ntBASIC6.05□□□□□ -1.44
RNF4P78317 AC089999.3-201ENST00000622440 577 ntBASIC6.05□□□□□ -1.44
RNF4P78317 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF4P78317 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF4P78317 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.05□□□□□ -1.44
RNF4P78317 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RNF4P78317 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RNF4P78317 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.05□□□□□ -1.44
RNF4P78317 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RNF4P78317 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RNF4P78317 AC005034.3-201ENST00000604845 1747 ntBASIC6.05□□□□□ -1.44
RNF4P78317 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF4P78317 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RNF4P78317 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.05□□□□□ -1.44
RNF4P78317 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
RNF4P78317 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF4P78317 AC062022.1-201ENST00000451026 1684 ntBASIC6.04□□□□□ -1.44
RNF4P78317 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF4P78317 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.04□□□□□ -1.44
RNF4P78317 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.04□□□□□ -1.44
RNF4P78317 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.04□□□□□ -1.44
RNF4P78317 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF4P78317 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF4P78317 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
RNF4P78317 AL121950.1-201ENST00000624993 2077 ntBASIC6.04□□□□□ -1.44
RNF4P78317 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF4P78317 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF4P78317 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.04□□□□□ -1.44
RNF4P78317 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RNF4P78317 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RNF4P78317 AC025750.1-201ENST00000399891 379 ntBASIC6.04□□□□□ -1.44
RNF4P78317 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF4P78317 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC6.04□□□□□ -1.44
RNF4P78317 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF4P78317 MTATP6P27-201ENST00000416987 621 ntBASIC6.04□□□□□ -1.44
RNF4P78317 USP9YP13-201ENST00000417797 480 ntBASIC6.04□□□□□ -1.44
RNF4P78317 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.04□□□□□ -1.44
RNF4P78317 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF4P78317 AC007742.1-201ENST00000425789 329 ntBASIC6.04□□□□□ -1.44
RNF4P78317 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF4P78317 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC6.04□□□□□ -1.44
RNF4P78317 AC083862.1-201ENST00000427378 1242 ntBASIC6.04□□□□□ -1.44
RNF4P78317 VDAC1P6-201ENST00000430062 855 ntBASIC6.04□□□□□ -1.44
RNF4P78317 BMS1P19-201ENST00000433925 393 ntBASIC6.04□□□□□ -1.44
RNF4P78317 ELOCP26-201ENST00000436067 329 ntBASIC6.04□□□□□ -1.44
RNF4P78317 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF4P78317 BMS1P10-201ENST00000443754 1120 ntBASIC6.04□□□□□ -1.44
RNF4P78317 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF4P78317 YWHAQP9-201ENST00000445891 512 ntBASIC6.04□□□□□ -1.44
RNF4P78317 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF4P78317 TPT1P14-201ENST00000448018 505 ntBASIC6.04□□□□□ -1.44
RNF4P78317 AC012123.2-201ENST00000485809 248 ntBASIC6.04□□□□□ -1.44
RNF4P78317 AC022415.1-202ENST00000486612 523 ntBASIC6.04□□□□□ -1.44
RNF4P78317 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.04□□□□□ -1.44
RNF4P78317 MTCYBP17-201ENST00000503579 789 ntBASIC6.04□□□□□ -1.44
RNF4P78317 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC6.04□□□□□ -1.44
RNF4P78317 MAST4-IT1-201ENST00000514241 658 ntBASIC6.04□□□□□ -1.44
RNF4P78317 PAICSP4-201ENST00000517543 1253 ntBASIC6.04□□□□□ -1.44
RNF4P78317 OR5M7P-201ENST00000526140 972 ntBASIC6.04□□□□□ -1.44
RNF4P78317 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.04□□□□□ -1.44
RNF4P78317 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF4P78317 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF4P78317 OR6C73P-201ENST00000546432 358 ntBASIC6.04□□□□□ -1.44
RNF4P78317 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.04□□□□□ -1.44
RNF4P78317 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.04□□□□□ -1.44
RNF4P78317 EIF5A2P1-201ENST00000564027 460 ntBASIC6.04□□□□□ -1.44
RNF4P78317 MIR5095-201ENST00000578844 88 ntBASIC6.04□□□□□ -1.44
RNF4P78317 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF4P78317 AC006504.3-201ENST00000586818 523 ntBASIC6.04□□□□□ -1.44
RNF4P78317 VN1R79P-201ENST00000593540 513 ntBASIC6.04□□□□□ -1.44
RNF4P78317 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF4P78317 AP000907.4-201ENST00000604143 237 ntBASIC6.04□□□□□ -1.44
RNF4P78317 AC091488.1-201ENST00000604239 660 ntBASIC6.04□□□□□ -1.44
RNF4P78317 AC019257.2-201ENST00000605539 497 ntBASIC6.04□□□□□ -1.44
RNF4P78317 AL031658.2-201ENST00000616850 651 ntBASIC6.04□□□□□ -1.44
RNF4P78317 AC015726.3-201ENST00000624501 418 ntBASIC6.04□□□□□ -1.44
RNF4P78317 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.04□□□□□ -1.44
RNF4P78317 ATE1-AS1-202ENST00000636460 506 ntBASIC6.04□□□□□ -1.44
RNF4P78317 CRYM-AS1-204ENST00000637983 556 ntBASIC6.04□□□□□ -1.44
RNF4P78317 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
RNF4P78317 AC015689.2-201ENST00000528172 1738 ntBASIC6.04□□□□□ -1.44
RNF4P78317 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms