Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LSM6P62312 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LSM6P62312 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
LSM6P62312 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
LSM6P62312 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LSM6P62312 AC091046.3-201ENST00000631455 1574 ntBASIC4.18□□□□□ -1.74
LSM6P62312 AL133243.3-201ENST00000617415 3004 ntBASIC4.18□□□□□ -1.74
LSM6P62312 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LSM6P62312 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
LSM6P62312 AC109780.1-201ENST00000451768 1344 ntBASIC4.18□□□□□ -1.74
LSM6P62312 AL136164.3-201ENST00000624429 3978 ntBASIC4.18□□□□□ -1.74
LSM6P62312 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LSM6P62312 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
LSM6P62312 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
LSM6P62312 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.17□□□□□ -1.74
LSM6P62312 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.17□□□□□ -1.74
LSM6P62312 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LSM6P62312 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LSM6P62312 RN7SKP104-201ENST00000362605 328 ntBASIC4.17□□□□□ -1.74
LSM6P62312 RNA5SP28-201ENST00000363841 119 ntBASIC4.17□□□□□ -1.74
LSM6P62312 AL080315.1-201ENST00000406055 466 ntBASIC4.17□□□□□ -1.74
LSM6P62312 SPTLC1P2-201ENST00000407089 121 ntBASIC4.17□□□□□ -1.74
LSM6P62312 OR2AM1P-201ENST00000422137 422 ntBASIC4.17□□□□□ -1.74
LSM6P62312 GTF2IP2-201ENST00000424290 697 ntBASIC4.17□□□□□ -1.74
LSM6P62312 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.17□□□□□ -1.74
LSM6P62312 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.17□□□□□ -1.74
LSM6P62312 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.17□□□□□ -1.74
LSM6P62312 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LSM6P62312 OR52J1P-201ENST00000450596 932 ntBASIC4.17□□□□□ -1.74
LSM6P62312 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LSM6P62312 MTND6P32-201ENST00000457611 483 ntBASIC4.17□□□□□ -1.74
LSM6P62312 snoU13.20-201ENST00000459180 104 ntBASIC4.17□□□□□ -1.74
LSM6P62312 RN7SL177P-201ENST00000476596 299 ntBASIC4.17□□□□□ -1.74
LSM6P62312 RPL23AP37-201ENST00000479658 549 ntBASIC4.17□□□□□ -1.74
LSM6P62312 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.17□□□□□ -1.74
LSM6P62312 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.17□□□□□ -1.74
LSM6P62312 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.17□□□□□ -1.74
LSM6P62312 BTF3P13-201ENST00000513224 490 ntBASIC4.17□□□□□ -1.74
LSM6P62312 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.17□□□□□ -1.74
LSM6P62312 SCARNA21.2-201ENST00000516600 166 ntBASIC4.17□□□□□ -1.74
LSM6P62312 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.17□□□□□ -1.74
LSM6P62312 OR5AZ1P-201ENST00000527448 943 ntBASIC4.17□□□□□ -1.74
LSM6P62312 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.17□□□□□ -1.74
LSM6P62312 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.17□□□□□ -1.74
LSM6P62312 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.17□□□□□ -1.74
LSM6P62312 IMMP1LP1-201ENST00000605170 488 ntBASIC4.17□□□□□ -1.74
LSM6P62312 AP000894.4-201ENST00000610185 483 ntBASIC4.17□□□□□ -1.74
LSM6P62312 AC018529.3-201ENST00000624212 2254 ntBASIC4.17□□□□□ -1.74
LSM6P62312 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.17□□□□□ -1.74
LSM6P62312 AC068254.2-201ENST00000623938 3577 ntBASIC4.17□□□□□ -1.74
LSM6P62312 SAMMSON-226ENST00000642089 1582 ntBASIC4.17□□□□□ -1.74
LSM6P62312 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
LSM6P62312 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LSM6P62312 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LSM6P62312 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
LSM6P62312 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.16□□□□□ -1.74
LSM6P62312 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LSM6P62312 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.16□□□□□ -1.74
LSM6P62312 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
LSM6P62312 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.16□□□□□ -1.74
LSM6P62312 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
LSM6P62312 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
LSM6P62312 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LSM6P62312 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LSM6P62312 OR56B2P-201ENST00000317102 954 ntBASIC4.16□□□□□ -1.74
LSM6P62312 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.16□□□□□ -1.74
LSM6P62312 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
LSM6P62312 AC093719.1-202ENST00000392735 373 ntBASIC4.16□□□□□ -1.74
LSM6P62312 DPPA2P3-201ENST00000411853 655 ntBASIC4.16□□□□□ -1.74
LSM6P62312 RPS12P5-201ENST00000423449 371 ntBASIC4.16□□□□□ -1.74
LSM6P62312 TDGF1P1-201ENST00000445734 527 ntBASIC4.16□□□□□ -1.74
LSM6P62312 AL356390.1-201ENST00000455684 397 ntBASIC4.16□□□□□ -1.74
LSM6P62312 CCDC75P1-201ENST00000469247 791 ntBASIC4.16□□□□□ -1.74
LSM6P62312 RN7SL214P-201ENST00000487317 265 ntBASIC4.16□□□□□ -1.74
LSM6P62312 RPS4XP14-201ENST00000493072 781 ntBASIC4.16□□□□□ -1.74
LSM6P62312 SCARNA22-201ENST00000503991 125 ntBASIC4.16□□□□□ -1.74
LSM6P62312 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.16□□□□□ -1.74
LSM6P62312 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LSM6P62312 AC021146.3-201ENST00000511911 260 ntBASIC4.16□□□□□ -1.74
LSM6P62312 AC021006.3-201ENST00000530771 192 ntBASIC4.16□□□□□ -1.74
LSM6P62312 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.16□□□□□ -1.74
LSM6P62312 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.16□□□□□ -1.74
LSM6P62312 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.16□□□□□ -1.74
LSM6P62312 AC005520.3-201ENST00000602874 370 ntBASIC4.16□□□□□ -1.74
LSM6P62312 AL713998.2-201ENST00000604538 1198 ntBASIC4.16□□□□□ -1.74
LSM6P62312 AL391358.1-201ENST00000605342 190 ntBASIC4.16□□□□□ -1.74
LSM6P62312 COX6CP4-201ENST00000605798 228 ntBASIC4.16□□□□□ -1.74
LSM6P62312 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.16□□□□□ -1.74
LSM6P62312 SDR42E1P1-201ENST00000611327 477 ntBASIC4.16□□□□□ -1.74
LSM6P62312 uc_338.18-201ENST00000615451 175 ntBASIC4.16□□□□□ -1.74
LSM6P62312 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.16□□□□□ -1.74
LSM6P62312 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LSM6P62312 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LSM6P62312 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.16□□□□□ -1.74
LSM6P62312 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.16□□□□□ -1.74
LSM6P62312 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.16□□□□□ -1.74
LSM6P62312 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
LSM6P62312 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LSM6P62312 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
LSM6P62312 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms