Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.19□□□□□ -1.74
VBP1P61758 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VBP1P61758 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
VBP1P61758 AC007685.1-201ENST00000329806 452 ntBASIC4.19□□□□□ -1.74
VBP1P61758 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
VBP1P61758 RNA5SP151-201ENST00000365632 117 ntBASIC4.19□□□□□ -1.74
VBP1P61758 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.19□□□□□ -1.74
VBP1P61758 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.19□□□□□ -1.74
VBP1P61758 AL133325.1-201ENST00000421090 382 ntBASIC4.19□□□□□ -1.74
VBP1P61758 Z82198.3-201ENST00000421145 199 ntBASIC4.19□□□□□ -1.74
VBP1P61758 AL391219.1-201ENST00000422570 483 ntBASIC4.19□□□□□ -1.74
VBP1P61758 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.19□□□□□ -1.74
VBP1P61758 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VBP1P61758 SUMO2P3-201ENST00000438311 288 ntBASIC4.19□□□□□ -1.74
VBP1P61758 HIGD1AP8-201ENST00000453927 274 ntBASIC4.19□□□□□ -1.74
VBP1P61758 AC008897.1-201ENST00000494006 347 ntBASIC4.19□□□□□ -1.74
VBP1P61758 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.19□□□□□ -1.74
VBP1P61758 AC025445.1-201ENST00000502728 300 ntBASIC4.19□□□□□ -1.74
VBP1P61758 FTH1P9-201ENST00000513251 355 ntBASIC4.19□□□□□ -1.74
VBP1P61758 SCARNA21.2-201ENST00000516600 166 ntBASIC4.19□□□□□ -1.74
VBP1P61758 SMARCE1P4-201ENST00000523647 241 ntBASIC4.19□□□□□ -1.74
VBP1P61758 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.19□□□□□ -1.74
VBP1P61758 TOMM20P2-201ENST00000540082 421 ntBASIC4.19□□□□□ -1.74
VBP1P61758 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC4.19□□□□□ -1.74
VBP1P61758 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.19□□□□□ -1.74
VBP1P61758 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.19□□□□□ -1.74
VBP1P61758 MIR4716-201ENST00000579628 84 ntBASIC4.19□□□□□ -1.74
VBP1P61758 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.19□□□□□ -1.74
VBP1P61758 AC010245.2-201ENST00000606908 1167 ntBASIC4.19□□□□□ -1.74
VBP1P61758 AL356274.1-201ENST00000617064 410 ntBASIC4.19□□□□□ -1.74
VBP1P61758 AP001052.1-201ENST00000626421 99 ntBASIC4.19□□□□□ -1.74
VBP1P61758 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
VBP1P61758 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.19□□□□□ -1.74
VBP1P61758 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
VBP1P61758 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VBP1P61758 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VBP1P61758 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
VBP1P61758 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VBP1P61758 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.19□□□□□ -1.74
VBP1P61758 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VBP1P61758 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
VBP1P61758 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VBP1P61758 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VBP1P61758 RNA5SP22-201ENST00000365393 109 ntBASIC4.18□□□□□ -1.74
VBP1P61758 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.18□□□□□ -1.74
VBP1P61758 RNA5SP39-201ENST00000411245 120 ntBASIC4.18□□□□□ -1.74
VBP1P61758 AL390774.1-201ENST00000411924 246 ntBASIC4.18□□□□□ -1.74
VBP1P61758 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.18□□□□□ -1.74
VBP1P61758 CENPIP1-201ENST00000425713 902 ntBASIC4.18□□□□□ -1.74
VBP1P61758 AC093655.2-201ENST00000425735 631 ntBASIC4.18□□□□□ -1.74
VBP1P61758 NANOGP6-201ENST00000429190 847 ntBASIC4.18□□□□□ -1.74
VBP1P61758 NDUFA5P1-201ENST00000433858 341 ntBASIC4.18□□□□□ -1.74
VBP1P61758 RPS17P8-201ENST00000434525 335 ntBASIC4.18□□□□□ -1.74
VBP1P61758 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.18□□□□□ -1.74
VBP1P61758 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.18□□□□□ -1.74
VBP1P61758 AL161636.2-201ENST00000445179 927 ntBASIC4.18□□□□□ -1.74
VBP1P61758 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.18□□□□□ -1.74
VBP1P61758 EXTL2P1-201ENST00000446218 416 ntBASIC4.18□□□□□ -1.74
VBP1P61758 AC239809.1-201ENST00000450470 217 ntBASIC4.18□□□□□ -1.74
VBP1P61758 SNRPGP5-201ENST00000456003 220 ntBASIC4.18□□□□□ -1.74
VBP1P61758 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.18□□□□□ -1.74
VBP1P61758 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.18□□□□□ -1.74
VBP1P61758 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.18□□□□□ -1.74
VBP1P61758 AC098818.1-201ENST00000478593 252 ntBASIC4.18□□□□□ -1.74
VBP1P61758 METTL15P1-201ENST00000481421 1045 ntBASIC4.18□□□□□ -1.74
VBP1P61758 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
VBP1P61758 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.18□□□□□ -1.74
VBP1P61758 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.18□□□□□ -1.74
VBP1P61758 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.18□□□□□ -1.74
VBP1P61758 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.18□□□□□ -1.74
VBP1P61758 RNA5SP271-201ENST00000516700 88 ntBASIC4.18□□□□□ -1.74
VBP1P61758 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.18□□□□□ -1.74
VBP1P61758 IFITM8P-201ENST00000522529 394 ntBASIC4.18□□□□□ -1.74
VBP1P61758 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.18□□□□□ -1.74
VBP1P61758 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.18□□□□□ -1.74
VBP1P61758 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VBP1P61758 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.18□□□□□ -1.74
VBP1P61758 MIR1273E-201ENST00000581165 102 ntBASIC4.18□□□□□ -1.74
VBP1P61758 AC091178.1-203ENST00000584586 279 ntBASIC4.18□□□□□ -1.74
VBP1P61758 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
VBP1P61758 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.18□□□□□ -1.74
VBP1P61758 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.18□□□□□ -1.74
VBP1P61758 AC020634.1-201ENST00000608701 549 ntBASIC4.18□□□□□ -1.74
VBP1P61758 AC010809.3-201ENST00000621310 641 ntBASIC4.18□□□□□ -1.74
VBP1P61758 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.18□□□□□ -1.74
VBP1P61758 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.18□□□□□ -1.74
VBP1P61758 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VBP1P61758 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VBP1P61758 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VBP1P61758 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VBP1P61758 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
VBP1P61758 AC106871.1-201ENST00000568324 3102 ntBASIC4.17□□□□□ -1.74
VBP1P61758 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.17□□□□□ -1.74
VBP1P61758 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.17□□□□□ -1.74
VBP1P61758 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.17□□□□□ -1.74
VBP1P61758 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
VBP1P61758 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
VBP1P61758 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.17□□□□□ -1.74
VBP1P61758 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
VBP1P61758 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms