Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLRN1P58418 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CLRN1P58418 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.3□□□□□ -1.56
CLRN1P58418 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.3□□□□□ -1.56
CLRN1P58418 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLRN1P58418 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLRN1P58418 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLRN1P58418 AC012254.3-201ENST00000591183 2117 ntBASIC5.3□□□□□ -1.56
CLRN1P58418 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLRN1P58418 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.3□□□□□ -1.56
CLRN1P58418 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLRN1P58418 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CLRN1P58418 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLRN1P58418 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.29□□□□□ -1.56
CLRN1P58418 PPBPP2-201ENST00000513150 1362 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.29□□□□□ -1.56
CLRN1P58418 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.29□□□□□ -1.56
CLRN1P58418 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLRN1P58418 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLRN1P58418 Z95114.1-201ENST00000624264 14574 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 AC008627.1-201ENST00000517511 1704 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.29□□□□□ -1.56
CLRN1P58418 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLRN1P58418 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.29□□□□□ -1.56
CLRN1P58418 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLRN1P58418 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLRN1P58418 AL672167.1-206ENST00000356293 943 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 IGKV7-3-201ENST00000357453 298 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.29□□□□□ -1.56
CLRN1P58418 U3.4-201ENST00000363352 213 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLRN1P58418 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLRN1P58418 AC104297.1-201ENST00000393779 870 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLRN1P58418 RPL7P8-201ENST00000411964 730 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 TPT1P2-201ENST00000413105 503 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.29□□□□□ -1.56
CLRN1P58418 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.29□□□□□ -1.56
CLRN1P58418 MTCO2P34-201ENST00000421994 607 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLRN1P58418 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.29□□□□□ -1.56
CLRN1P58418 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.29□□□□□ -1.56
CLRN1P58418 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.29□□□□□ -1.56
CLRN1P58418 RPS24P1-201ENST00000438550 371 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 AL663074.2-201ENST00000440621 479 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.29□□□□□ -1.56
CLRN1P58418 AC097463.1-201ENST00000447288 481 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CLRN1P58418 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLRN1P58418 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLRN1P58418 SUMO2P4-201ENST00000504193 276 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLRN1P58418 AC122718.2-201ENST00000505325 591 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 AC091874.2-201ENST00000505889 720 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.29□□□□□ -1.56
CLRN1P58418 AC018797.1-201ENST00000510791 255 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLRN1P58418 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.29□□□□□ -1.56
CLRN1P58418 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5.29□□□□□ -1.56
CLRN1P58418 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLRN1P58418 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.29□□□□□ -1.56
CLRN1P58418 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.29□□□□□ -1.56
CLRN1P58418 AC023310.2-201ENST00000553844 547 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.29□□□□□ -1.56
CLRN1P58418 HMGN2P47-201ENST00000559378 272 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.29□□□□□ -1.56
CLRN1P58418 AGGF1P7-201ENST00000562369 913 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.29□□□□□ -1.56
CLRN1P58418 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.29□□□□□ -1.56
CLRN1P58418 BPTFP1-201ENST00000579209 492 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.29□□□□□ -1.56
CLRN1P58418 AC073648.5-201ENST00000603502 305 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 AL391497.1-201ENST00000608671 547 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.29□□□□□ -1.56
CLRN1P58418 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.29□□□□□ -1.56
CLRN1P58418 AC073968.1-201ENST00000618594 637 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 AL445670.1-201ENST00000618889 801 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 AL359740.1-201ENST00000624340 592 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 PCMTD1P7-201ENST00000634506 357 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLRN1P58418 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.29□□□□□ -1.56
CLRN1P58418 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLRN1P58418 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CLRN1P58418 RBPJP7-201ENST00000442803 1447 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 RBPJP5-201ENST00000449433 1447 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 AL158152.1-201ENST00000602652 1435 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CLRN1P58418 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLRN1P58418 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLRN1P58418 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLRN1P58418 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLRN1P58418 AC007996.1-201ENST00000620414 2821 ntBASIC5.29□□□□□ -1.56
CLRN1P58418 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.28□□□□□ -1.56
CLRN1P58418 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLRN1P58418 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLRN1P58418 AL161756.3-201ENST00000641216 2071 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms