Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH11P55287 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH11P55287 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH11P55287 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CDH11P55287 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH11P55287 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH11P55287 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH11P55287 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH11P55287 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH11P55287 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH11P55287 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.69□□□□□ -1.66
CDH11P55287 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH11P55287 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH11P55287 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CDH11P55287 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH11P55287 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH11P55287 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH11P55287 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CDH11P55287 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH11P55287 RNA5SP487-201ENST00000410186 122 ntBASIC4.68□□□□□ -1.66
CDH11P55287 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.68□□□□□ -1.66
CDH11P55287 AC013429.2-201ENST00000418798 781 ntBASIC4.68□□□□□ -1.66
CDH11P55287 AC007394.1-201ENST00000421941 531 ntBASIC4.68□□□□□ -1.66
CDH11P55287 MTND4LP13-201ENST00000425022 298 ntBASIC4.68□□□□□ -1.66
CDH11P55287 OR2AH1P-201ENST00000425717 928 ntBASIC4.68□□□□□ -1.66
CDH11P55287 AC009238.2-201ENST00000431026 355 ntBASIC4.68□□□□□ -1.66
CDH11P55287 NDUFA5P10-201ENST00000432147 357 ntBASIC4.68□□□□□ -1.66
CDH11P55287 OR52B5P-201ENST00000435337 951 ntBASIC4.68□□□□□ -1.66
CDH11P55287 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH11P55287 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH11P55287 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH11P55287 AC245047.2-201ENST00000441060 530 ntBASIC4.68□□□□□ -1.66
CDH11P55287 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CDH11P55287 MTCYBP21-201ENST00000443300 1113 ntBASIC4.68□□□□□ -1.66
CDH11P55287 EEF1B2P5-201ENST00000444820 548 ntBASIC4.68□□□□□ -1.66
CDH11P55287 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH11P55287 HMGB1P5-202ENST00000451497 985 ntBASIC4.68□□□□□ -1.66
CDH11P55287 AC104634.1-201ENST00000452720 462 ntBASIC4.68□□□□□ -1.66
CDH11P55287 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.68□□□□□ -1.66
CDH11P55287 AC008953.1-201ENST00000497334 318 ntBASIC4.68□□□□□ -1.66
CDH11P55287 HMGB3P16-201ENST00000508037 287 ntBASIC4.68□□□□□ -1.66
CDH11P55287 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH11P55287 SCARNA1-201ENST00000517138 166 ntBASIC4.68□□□□□ -1.66
CDH11P55287 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH11P55287 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CDH11P55287 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.68□□□□□ -1.66
CDH11P55287 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH11P55287 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH11P55287 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.68□□□□□ -1.66
CDH11P55287 HMGN2P6-201ENST00000551091 273 ntBASIC4.68□□□□□ -1.66
CDH11P55287 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.68□□□□□ -1.66
CDH11P55287 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH11P55287 AL390726.5-202ENST00000564800 256 ntBASIC4.68□□□□□ -1.66
CDH11P55287 AC233702.9-201ENST00000581528 203 ntBASIC4.68□□□□□ -1.66
CDH11P55287 RN7SL435P-201ENST00000584418 282 ntBASIC4.68□□□□□ -1.66
CDH11P55287 AC245884.10-201ENST00000597355 337 ntBASIC4.68□□□□□ -1.66
CDH11P55287 AC008814.1-201ENST00000603797 406 ntBASIC4.68□□□□□ -1.66
CDH11P55287 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH11P55287 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH11P55287 AC112503.2-201ENST00000609005 552 ntBASIC4.68□□□□□ -1.66
CDH11P55287 AC004241.3-201ENST00000611728 517 ntBASIC4.68□□□□□ -1.66
CDH11P55287 AC118658.2-201ENST00000618697 459 ntBASIC4.68□□□□□ -1.66
CDH11P55287 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH11P55287 AC023510.2-201ENST00000622162 746 ntBASIC4.68□□□□□ -1.66
CDH11P55287 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH11P55287 OR52B5P-202ENST00000641118 1110 ntBASIC4.68□□□□□ -1.66
CDH11P55287 CASC19-222ENST00000641321 1173 ntBASIC4.68□□□□□ -1.66
CDH11P55287 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
CDH11P55287 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.68□□□□□ -1.66
CDH11P55287 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH11P55287 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH11P55287 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.68□□□□□ -1.66
CDH11P55287 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH11P55287 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH11P55287 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CDH11P55287 AC011493.1-201ENST00000596753 1632 ntBASIC4.68□□□□□ -1.66
CDH11P55287 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH11P55287 STX3-208ENST00000641815 3236 ntBASIC4.67□□□□□ -1.66
CDH11P55287 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CDH11P55287 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
CDH11P55287 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH11P55287 ZNF733P-202ENST00000444809 1573 ntBASIC4.67□□□□□ -1.66
CDH11P55287 CASC19-281ENST00000642118 1554 ntBASIC4.67□□□□□ -1.66
CDH11P55287 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.67□□□□□ -1.66
CDH11P55287 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH11P55287 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDH11P55287 RNU1-74P-201ENST00000384108 171 ntBASIC4.67□□□□□ -1.66
CDH11P55287 RNU6-925P-201ENST00000384629 104 ntBASIC4.67□□□□□ -1.66
CDH11P55287 MIR105-1-201ENST00000385222 81 ntBASIC4.67□□□□□ -1.66
CDH11P55287 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDH11P55287 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDH11P55287 RNU6-796P-201ENST00000391086 107 ntBASIC4.67□□□□□ -1.66
CDH11P55287 AL078599.1-201ENST00000402075 293 ntBASIC4.67□□□□□ -1.66
CDH11P55287 U3.32-201ENST00000408116 212 ntBASIC4.67□□□□□ -1.66
CDH11P55287 RNU4-74P-201ENST00000411280 161 ntBASIC4.67□□□□□ -1.66
CDH11P55287 RN7SKP273-201ENST00000411392 314 ntBASIC4.67□□□□□ -1.66
CDH11P55287 AC069282.1-201ENST00000411911 526 ntBASIC4.67□□□□□ -1.66
CDH11P55287 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.67□□□□□ -1.66
CDH11P55287 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH11P55287 CYCSP20-201ENST00000473154 315 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms