Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.61□□□□□ -1.51
COPB1P53618 SNORA19.3-201ENST00000516165 130 ntBASIC5.61□□□□□ -1.51
COPB1P53618 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.61□□□□□ -1.51
COPB1P53618 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COPB1P53618 AC023538.1-201ENST00000534576 736 ntBASIC5.61□□□□□ -1.51
COPB1P53618 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.61□□□□□ -1.51
COPB1P53618 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.61□□□□□ -1.51
COPB1P53618 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.61□□□□□ -1.51
COPB1P53618 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.61□□□□□ -1.51
COPB1P53618 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.61□□□□□ -1.51
COPB1P53618 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.61□□□□□ -1.51
COPB1P53618 AP000919.1-202ENST00000581139 1264 ntBASIC5.61□□□□□ -1.51
COPB1P53618 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.61□□□□□ -1.51
COPB1P53618 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.61□□□□□ -1.51
COPB1P53618 AC008536.1-201ENST00000602872 669 ntBASIC5.61□□□□□ -1.51
COPB1P53618 AL160237.3-201ENST00000604114 1013 ntBASIC5.61□□□□□ -1.51
COPB1P53618 ELOCP35-201ENST00000604289 336 ntBASIC5.61□□□□□ -1.51
COPB1P53618 AC009948.4-201ENST00000604692 675 ntBASIC5.61□□□□□ -1.51
COPB1P53618 AC079395.3-201ENST00000615161 484 ntBASIC5.61□□□□□ -1.51
COPB1P53618 AC008432.1-201ENST00000615912 1320 ntBASIC5.61□□□□□ -1.51
COPB1P53618 AC015914.2-201ENST00000618167 288 ntBASIC5.61□□□□□ -1.51
COPB1P53618 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.61□□□□□ -1.51
COPB1P53618 AC135068.12-201ENST00000637370 931 ntBASIC5.61□□□□□ -1.51
COPB1P53618 AC006927.2-201ENST00000639256 389 ntBASIC5.61□□□□□ -1.51
COPB1P53618 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
COPB1P53618 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
COPB1P53618 MUC2-202ENST00000613187 4845 ntBASIC5.61□□□□□ -1.51
COPB1P53618 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COPB1P53618 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COPB1P53618 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
COPB1P53618 AC007996.1-201ENST00000620414 2821 ntBASIC5.61□□□□□ -1.51
COPB1P53618 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPB1P53618 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
COPB1P53618 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.6□□□□□ -1.51
COPB1P53618 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPB1P53618 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.6□□□□□ -1.51
COPB1P53618 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COPB1P53618 AL359715.4-201ENST00000606629 1436 ntBASIC5.6□□□□□ -1.51
COPB1P53618 AC235565.1-201ENST00000456962 1325 ntBASIC5.6□□□□□ -1.51
COPB1P53618 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPB1P53618 RN7SKP160-201ENST00000363804 340 ntBASIC5.6□□□□□ -1.51
COPB1P53618 SNORA74A-201ENST00000364089 198 ntBASIC5.6□□□□□ -1.51
COPB1P53618 SNORA2.3-201ENST00000383920 135 ntBASIC5.6□□□□□ -1.51
COPB1P53618 AC007068.1-201ENST00000396690 844 ntBASIC5.6□□□□□ -1.51
COPB1P53618 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.6□□□□□ -1.51
COPB1P53618 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.6□□□□□ -1.51
COPB1P53618 XKRYP1-201ENST00000423438 492 ntBASIC5.6□□□□□ -1.51
COPB1P53618 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.6□□□□□ -1.51
COPB1P53618 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.6□□□□□ -1.51
COPB1P53618 AL160175.1-201ENST00000428124 247 ntBASIC5.6□□□□□ -1.51
COPB1P53618 XKRYP2-201ENST00000432915 492 ntBASIC5.6□□□□□ -1.51
COPB1P53618 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.6□□□□□ -1.51
COPB1P53618 MTCO2P20-201ENST00000437339 673 ntBASIC5.6□□□□□ -1.51
COPB1P53618 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.6□□□□□ -1.51
COPB1P53618 AC092473.1-201ENST00000441098 221 ntBASIC5.6□□□□□ -1.51
COPB1P53618 Z77249.1-201ENST00000444622 1175 ntBASIC5.6□□□□□ -1.51
COPB1P53618 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.6□□□□□ -1.51
COPB1P53618 AC092691.2-201ENST00000461787 803 ntBASIC5.6□□□□□ -1.51
COPB1P53618 AC073073.1-201ENST00000493920 463 ntBASIC5.6□□□□□ -1.51
COPB1P53618 RN7SL466P-201ENST00000497546 295 ntBASIC5.6□□□□□ -1.51
COPB1P53618 AC010627.1-201ENST00000503819 1294 ntBASIC5.6□□□□□ -1.51
COPB1P53618 AC112673.1-201ENST00000513168 575 ntBASIC5.6□□□□□ -1.51
COPB1P53618 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.6□□□□□ -1.51
COPB1P53618 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.6□□□□□ -1.51
COPB1P53618 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.6□□□□□ -1.51
COPB1P53618 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.6□□□□□ -1.51
COPB1P53618 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COPB1P53618 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.6□□□□□ -1.51
COPB1P53618 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.6□□□□□ -1.51
COPB1P53618 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPB1P53618 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.6□□□□□ -1.51
COPB1P53618 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPB1P53618 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPB1P53618 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.6□□□□□ -1.51
COPB1P53618 MIR4489-201ENST00000578869 62 ntBASIC5.6□□□□□ -1.51
COPB1P53618 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.6□□□□□ -1.51
COPB1P53618 OR7E18P-201ENST00000592589 702 ntBASIC5.6□□□□□ -1.51
COPB1P53618 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.6□□□□□ -1.51
COPB1P53618 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
COPB1P53618 AL450336.1-201ENST00000605180 586 ntBASIC5.6□□□□□ -1.51
COPB1P53618 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.6□□□□□ -1.51
COPB1P53618 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.6□□□□□ -1.51
COPB1P53618 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.6□□□□□ -1.51
COPB1P53618 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COPB1P53618 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPB1P53618 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.6□□□□□ -1.51
COPB1P53618 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPB1P53618 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COPB1P53618 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.6□□□□□ -1.51
COPB1P53618 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.59□□□□□ -1.51
COPB1P53618 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
COPB1P53618 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
COPB1P53618 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
COPB1P53618 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.59□□□□□ -1.51
COPB1P53618 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.59□□□□□ -1.51
COPB1P53618 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.59□□□□□ -1.51
COPB1P53618 RNU5B-4P-201ENST00000363508 111 ntBASIC5.59□□□□□ -1.51
COPB1P53618 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
COPB1P53618 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.59□□□□□ -1.51
COPB1P53618 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms