Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 CYCSP22-201ENST00000517555 339 ntBASIC6.41□□□□□ -1.38
MRE11P49959 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.41□□□□□ -1.38
MRE11P49959 AC100784.1-201ENST00000522790 310 ntBASIC6.41□□□□□ -1.38
MRE11P49959 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.41□□□□□ -1.38
MRE11P49959 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
MRE11P49959 HAUS8P1-201ENST00000549005 542 ntBASIC6.41□□□□□ -1.38
MRE11P49959 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.41□□□□□ -1.38
MRE11P49959 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
MRE11P49959 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
MRE11P49959 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.41□□□□□ -1.38
MRE11P49959 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
MRE11P49959 AC068768.2-201ENST00000602352 343 ntBASIC6.41□□□□□ -1.38
MRE11P49959 FO393422.1-201ENST00000603908 708 ntBASIC6.41□□□□□ -1.38
MRE11P49959 AC073387.2-201ENST00000604797 784 ntBASIC6.41□□□□□ -1.38
MRE11P49959 AC090425.2-201ENST00000608818 501 ntBASIC6.41□□□□□ -1.38
MRE11P49959 AC011939.3-201ENST00000613686 466 ntBASIC6.41□□□□□ -1.38
MRE11P49959 AC100827.5-201ENST00000615883 426 ntBASIC6.41□□□□□ -1.38
MRE11P49959 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
MRE11P49959 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
MRE11P49959 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.41□□□□□ -1.38
MRE11P49959 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.41□□□□□ -1.38
MRE11P49959 SMG1P4-204ENST00000523028 4131 ntBASIC6.41□□□□□ -1.38
MRE11P49959 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
MRE11P49959 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
MRE11P49959 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
MRE11P49959 AC100757.1-201ENST00000616872 1835 ntBASIC6.41□□□□□ -1.38
MRE11P49959 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
MRE11P49959 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
MRE11P49959 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
MRE11P49959 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.41□□□□□ -1.38
MRE11P49959 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.4□□□□□ -1.38
MRE11P49959 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
MRE11P49959 AC093591.2-201ENST00000565254 3843 ntBASIC6.4□□□□□ -1.38
MRE11P49959 AC011447.7-201ENST00000624228 1590 ntBASIC6.4□□□□□ -1.38
MRE11P49959 AL031595.2-201ENST00000624215 19071 ntBASIC6.4□□□□□ -1.38
MRE11P49959 RNFT1P3-201ENST00000340898 1052 ntBASIC6.4□□□□□ -1.38
MRE11P49959 MIR365B-201ENST00000362317 111 ntBASIC6.4□□□□□ -1.38
MRE11P49959 RNU6-1331P-201ENST00000363658 106 ntBASIC6.4□□□□□ -1.38
MRE11P49959 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
MRE11P49959 RPL10P10-201ENST00000403509 664 ntBASIC6.4□□□□□ -1.38
MRE11P49959 PPIAP9-201ENST00000403866 498 ntBASIC6.4□□□□□ -1.38
MRE11P49959 UBE2V1P11-201ENST00000411559 285 ntBASIC6.4□□□□□ -1.38
MRE11P49959 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.4□□□□□ -1.38
MRE11P49959 RPL23AP27-201ENST00000415161 451 ntBASIC6.4□□□□□ -1.38
MRE11P49959 RPL35AP31-201ENST00000418340 337 ntBASIC6.4□□□□□ -1.38
MRE11P49959 AC090960.1-201ENST00000421072 306 ntBASIC6.4□□□□□ -1.38
MRE11P49959 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.4□□□□□ -1.38
MRE11P49959 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.4□□□□□ -1.38
MRE11P49959 RIMKLBP2-201ENST00000424737 654 ntBASIC6.4□□□□□ -1.38
MRE11P49959 AC093422.3-201ENST00000428506 305 ntBASIC6.4□□□□□ -1.38
MRE11P49959 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
MRE11P49959 CFL1P1-202ENST00000432948 411 ntBASIC6.4□□□□□ -1.38
MRE11P49959 Z80107.2-201ENST00000445127 392 ntBASIC6.4□□□□□ -1.38
MRE11P49959 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC6.4□□□□□ -1.38
MRE11P49959 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC6.4□□□□□ -1.38
MRE11P49959 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.4□□□□□ -1.38
MRE11P49959 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.4□□□□□ -1.38
MRE11P49959 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.4□□□□□ -1.38
MRE11P49959 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.4□□□□□ -1.38
MRE11P49959 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC6.4□□□□□ -1.38
MRE11P49959 BET1P1-201ENST00000482276 359 ntBASIC6.4□□□□□ -1.38
MRE11P49959 RN7SL30P-201ENST00000488416 306 ntBASIC6.4□□□□□ -1.38
MRE11P49959 AC008953.1-201ENST00000497334 318 ntBASIC6.4□□□□□ -1.38
MRE11P49959 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.4□□□□□ -1.38
MRE11P49959 AC067904.2-201ENST00000517322 1283 ntBASIC6.4□□□□□ -1.38
MRE11P49959 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC6.4□□□□□ -1.38
MRE11P49959 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.4□□□□□ -1.38
MRE11P49959 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
MRE11P49959 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.4□□□□□ -1.38
MRE11P49959 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.4□□□□□ -1.38
MRE11P49959 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.4□□□□□ -1.38
MRE11P49959 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.4□□□□□ -1.38
MRE11P49959 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.4□□□□□ -1.38
MRE11P49959 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.4□□□□□ -1.38
MRE11P49959 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
MRE11P49959 AC108738.1-201ENST00000603703 237 ntBASIC6.4□□□□□ -1.38
MRE11P49959 QTRT1P1-201ENST00000604344 1078 ntBASIC6.4□□□□□ -1.38
MRE11P49959 AC145423.1-201ENST00000605712 336 ntBASIC6.4□□□□□ -1.38
MRE11P49959 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC6.4□□□□□ -1.38
MRE11P49959 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.4□□□□□ -1.38
MRE11P49959 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
MRE11P49959 AL512652.1-201ENST00000619006 500 ntBASIC6.4□□□□□ -1.38
MRE11P49959 AC010435.1-201ENST00000623353 1177 ntBASIC6.4□□□□□ -1.38
MRE11P49959 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.4□□□□□ -1.38
MRE11P49959 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
MRE11P49959 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
MRE11P49959 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.4□□□□□ -1.39
MRE11P49959 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.4□□□□□ -1.39
MRE11P49959 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.4□□□□□ -1.39
MRE11P49959 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.4□□□□□ -1.39
MRE11P49959 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
MRE11P49959 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
MRE11P49959 AC007996.1-201ENST00000620414 2821 ntBASIC6.4□□□□□ -1.39
MRE11P49959 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MRE11P49959 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MRE11P49959 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
MRE11P49959 AC008549.2-201ENST00000333482 706 ntBASIC6.39□□□□□ -1.39
MRE11P49959 AC017079.1-201ENST00000333650 415 ntBASIC6.39□□□□□ -1.39
MRE11P49959 Y_RNA.169-201ENST00000363745 96 ntBASIC6.39□□□□□ -1.39
MRE11P49959 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms