Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHMT2P34897 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.64□□□□□ -1.67
SHMT2P34897 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.63□□□□□ -1.67
SHMT2P34897 AC092111.2-201ENST00000611627 1414 ntBASIC4.63□□□□□ -1.67
SHMT2P34897 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SHMT2P34897 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
SHMT2P34897 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SHMT2P34897 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SHMT2P34897 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.63□□□□□ -1.67
SHMT2P34897 AL034370.1-201ENST00000397254 1590 ntBASIC4.63□□□□□ -1.67
SHMT2P34897 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHMT2P34897 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SHMT2P34897 RNU6-1331P-201ENST00000363658 106 ntBASIC4.63□□□□□ -1.67
SHMT2P34897 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHMT2P34897 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHMT2P34897 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SHMT2P34897 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SHMT2P34897 VN1R31P-201ENST00000417498 730 ntBASIC4.63□□□□□ -1.67
SHMT2P34897 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHMT2P34897 VN1R37P-201ENST00000419096 748 ntBASIC4.63□□□□□ -1.67
SHMT2P34897 OR2B7P-201ENST00000429302 934 ntBASIC4.63□□□□□ -1.67
SHMT2P34897 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.63□□□□□ -1.67
SHMT2P34897 AC016831.4-201ENST00000438302 307 ntBASIC4.63□□□□□ -1.67
SHMT2P34897 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.63□□□□□ -1.67
SHMT2P34897 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.63□□□□□ -1.67
SHMT2P34897 OR7L1P-201ENST00000456181 380 ntBASIC4.63□□□□□ -1.67
SHMT2P34897 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.63□□□□□ -1.67
SHMT2P34897 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.63□□□□□ -1.67
SHMT2P34897 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.63□□□□□ -1.67
SHMT2P34897 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.63□□□□□ -1.67
SHMT2P34897 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.63□□□□□ -1.67
SHMT2P34897 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.63□□□□□ -1.67
SHMT2P34897 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.63□□□□□ -1.67
SHMT2P34897 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.63□□□□□ -1.67
SHMT2P34897 AC073342.3-201ENST00000624211 193 ntBASIC4.63□□□□□ -1.67
SHMT2P34897 UGT2B26P-201ENST00000508672 1613 ntBASIC4.63□□□□□ -1.67
SHMT2P34897 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHMT2P34897 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHMT2P34897 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SHMT2P34897 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHMT2P34897 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHMT2P34897 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHMT2P34897 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.63□□□□□ -1.67
SHMT2P34897 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
SHMT2P34897 AL442639.1-201ENST00000625030 1899 ntBASIC4.62□□□□□ -1.67
SHMT2P34897 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SHMT2P34897 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.62□□□□□ -1.67
SHMT2P34897 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.62□□□□□ -1.67
SHMT2P34897 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.62□□□□□ -1.67
SHMT2P34897 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
SHMT2P34897 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHMT2P34897 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.62□□□□□ -1.67
SHMT2P34897 MIR298-201ENST00000401212 88 ntBASIC4.62□□□□□ -1.67
SHMT2P34897 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.62□□□□□ -1.67
SHMT2P34897 RSU1P3-201ENST00000412878 835 ntBASIC4.62□□□□□ -1.67
SHMT2P34897 AC098592.2-201ENST00000413158 265 ntBASIC4.62□□□□□ -1.67
SHMT2P34897 AC096644.3-201ENST00000416788 338 ntBASIC4.62□□□□□ -1.67
SHMT2P34897 TMX2P1-201ENST00000436507 708 ntBASIC4.62□□□□□ -1.67
SHMT2P34897 AC005154.2-201ENST00000438110 379 ntBASIC4.62□□□□□ -1.67
SHMT2P34897 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.62□□□□□ -1.67
SHMT2P34897 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.62□□□□□ -1.67
SHMT2P34897 SEPT7P6-201ENST00000469999 1143 ntBASIC4.62□□□□□ -1.67
SHMT2P34897 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.62□□□□□ -1.67
SHMT2P34897 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SHMT2P34897 AC091868.1-201ENST00000508746 304 ntBASIC4.62□□□□□ -1.67
SHMT2P34897 OR7H2P-201ENST00000513483 306 ntBASIC4.62□□□□□ -1.67
SHMT2P34897 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.62□□□□□ -1.67
SHMT2P34897 AC008676.3-201ENST00000521237 435 ntBASIC4.62□□□□□ -1.67
SHMT2P34897 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.62□□□□□ -1.67
SHMT2P34897 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.62□□□□□ -1.67
SHMT2P34897 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.62□□□□□ -1.67
SHMT2P34897 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.62□□□□□ -1.67
SHMT2P34897 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.62□□□□□ -1.67
SHMT2P34897 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.62□□□□□ -1.67
SHMT2P34897 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.62□□□□□ -1.67
SHMT2P34897 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.62□□□□□ -1.67
SHMT2P34897 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.62□□□□□ -1.67
SHMT2P34897 OR7A19P-201ENST00000608051 733 ntBASIC4.62□□□□□ -1.67
SHMT2P34897 OR7M1P-201ENST00000608946 533 ntBASIC4.62□□□□□ -1.67
SHMT2P34897 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.62□□□□□ -1.67
SHMT2P34897 AL121890.2-201ENST00000617644 465 ntBASIC4.62□□□□□ -1.67
SHMT2P34897 MIR6853-201ENST00000619642 74 ntBASIC4.62□□□□□ -1.67
SHMT2P34897 AC011815.3-201ENST00000624194 473 ntBASIC4.62□□□□□ -1.67
SHMT2P34897 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHMT2P34897 DHX9P1-201ENST00000436565 3076 ntBASIC4.62□□□□□ -1.67
SHMT2P34897 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SHMT2P34897 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHMT2P34897 RBPJP2-201ENST00000618187 1444 ntBASIC4.62□□□□□ -1.67
SHMT2P34897 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.62□□□□□ -1.67
SHMT2P34897 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.62□□□□□ -1.67
SHMT2P34897 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SHMT2P34897 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHMT2P34897 AL121950.1-201ENST00000624993 2077 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHMT2P34897 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHMT2P34897 Y_RNA.62-201ENST00000362840 99 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 RNU1-83P-201ENST00000363426 164 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SHMT2P34897 MIR137-201ENST00000385223 102 ntBASIC4.61□□□□□ -1.67
SHMT2P34897 U3.35-201ENST00000408405 208 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 193.2 ms