Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.65□□□□□ -1.5
SLC6A4P31645 AP001269.3-201ENST00000588718 329 ntBASIC5.65□□□□□ -1.5
SLC6A4P31645 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.65□□□□□ -1.5
SLC6A4P31645 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.65□□□□□ -1.5
SLC6A4P31645 AL021707.7-201ENST00000607991 416 ntBASIC5.65□□□□□ -1.5
SLC6A4P31645 AC245008.1-201ENST00000608123 476 ntBASIC5.65□□□□□ -1.5
SLC6A4P31645 AC024257.5-201ENST00000612739 531 ntBASIC5.65□□□□□ -1.5
SLC6A4P31645 AL162574.1-201ENST00000615702 950 ntBASIC5.65□□□□□ -1.5
SLC6A4P31645 AL603755.1-201ENST00000619504 163 ntBASIC5.65□□□□□ -1.5
SLC6A4P31645 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.65□□□□□ -1.5
SLC6A4P31645 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.65□□□□□ -1.5
SLC6A4P31645 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SLC6A4P31645 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SLC6A4P31645 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SLC6A4P31645 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SLC6A4P31645 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.65□□□□□ -1.51
SLC6A4P31645 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SLC6A4P31645 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
SLC6A4P31645 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SLC6A4P31645 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SLC6A4P31645 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
SLC6A4P31645 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SLC6A4P31645 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
SLC6A4P31645 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SLC6A4P31645 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SLC6A4P31645 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC6A4P31645 AC018628.1-201ENST00000624147 3819 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC6A4P31645 AC107021.2-201ENST00000567714 2095 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SLC6A4P31645 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SLC6A4P31645 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC6A4P31645 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SLC6A4P31645 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SLC6A4P31645 RNA5SP183-201ENST00000362452 119 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 SNORD113-6-201ENST00000363345 75 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 SNORD116-1-201ENST00000384335 95 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 HNRNPDP2-201ENST00000406475 478 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 AL355433.1-201ENST00000422804 300 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 AL390023.1-201ENST00000428836 262 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 RPL7P56-201ENST00000429441 717 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 RPL7L1P9-201ENST00000431298 745 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC6A4P31645 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.64□□□□□ -1.51
SLC6A4P31645 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC6A4P31645 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC6A4P31645 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC6A4P31645 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC6A4P31645 USP9YP25-201ENST00000457708 443 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC6A4P31645 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC6A4P31645 AC091951.3-201ENST00000504093 246 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 PGAM1P13-201ENST00000507497 754 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC6A4P31645 MRPS33P3-201ENST00000513456 322 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC6A4P31645 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.64□□□□□ -1.51
SLC6A4P31645 OR5AK3P-201ENST00000527486 1297 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC6A4P31645 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SLC6A4P31645 CYP2C60P-201ENST00000566088 139 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 MIR1269B-201ENST00000580405 75 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC6A4P31645 AP000769.2-201ENST00000602344 396 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 MTND3P19-201ENST00000603825 345 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC6A4P31645 AL022161.1-201ENST00000604390 213 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 AC121247.2-201ENST00000604776 136 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC6A4P31645 AC011939.3-201ENST00000613686 466 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC6A4P31645 AC011815.3-201ENST00000624194 473 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 CASC19-264ENST00000641912 1184 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.64□□□□□ -1.51
SLC6A4P31645 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC6A4P31645 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC6A4P31645 AP000432.2-201ENST00000624164 2048 ntBASIC5.64□□□□□ -1.51
SLC6A4P31645 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC6A4P31645 AL353796.1-201ENST00000561542 3241 ntBASIC5.63□□□□□ -1.51
SLC6A4P31645 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC6A4P31645 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SLC6A4P31645 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC6A4P31645 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC6A4P31645 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC6A4P31645 FAM133CP-201ENST00000332869 704 ntBASIC5.63□□□□□ -1.51
SLC6A4P31645 SNORA74A-201ENST00000364089 198 ntBASIC5.63□□□□□ -1.51
SLC6A4P31645 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.63□□□□□ -1.51
SLC6A4P31645 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.63□□□□□ -1.51
SLC6A4P31645 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SLC6A4P31645 AL133388.1-201ENST00000404509 287 ntBASIC5.63□□□□□ -1.51
SLC6A4P31645 OR4K12P-201ENST00000406538 961 ntBASIC5.63□□□□□ -1.51
SLC6A4P31645 AL590084.1-201ENST00000407885 387 ntBASIC5.63□□□□□ -1.51
SLC6A4P31645 VTA1P1-201ENST00000414044 866 ntBASIC5.63□□□□□ -1.51
SLC6A4P31645 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC6A4P31645 RIMKLBP2-201ENST00000424737 654 ntBASIC5.63□□□□□ -1.51
SLC6A4P31645 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.63□□□□□ -1.51
SLC6A4P31645 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC6A4P31645 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.63□□□□□ -1.51
SLC6A4P31645 CDY12P-201ENST00000440679 1015 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms