Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.48□□□□□ -1.37
CPS1P31327 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CPS1P31327 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CPS1P31327 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
CPS1P31327 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
CPS1P31327 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.48□□□□□ -1.37
CPS1P31327 AL669831.5-218ENST00000591702 1873 ntBASIC6.48□□□□□ -1.37
CPS1P31327 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CPS1P31327 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CPS1P31327 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.47□□□□□ -1.37
CPS1P31327 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CPS1P31327 ICE2P1-201ENST00000512800 1849 ntBASIC6.47□□□□□ -1.37
CPS1P31327 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CPS1P31327 RNA5SP119-201ENST00000362715 117 ntBASIC6.47□□□□□ -1.37
CPS1P31327 RNU1-130P-201ENST00000363930 160 ntBASIC6.47□□□□□ -1.37
CPS1P31327 MIR7-3-201ENST00000384898 110 ntBASIC6.47□□□□□ -1.37
CPS1P31327 KRR1P1-201ENST00000419430 803 ntBASIC6.47□□□□□ -1.37
CPS1P31327 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.47□□□□□ -1.37
CPS1P31327 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.47□□□□□ -1.37
CPS1P31327 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.47□□□□□ -1.37
CPS1P31327 AC005899.7-201ENST00000618199 588 ntBASIC6.47□□□□□ -1.37
CPS1P31327 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.47□□□□□ -1.37
CPS1P31327 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CPS1P31327 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CPS1P31327 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.47□□□□□ -1.37
CPS1P31327 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CPS1P31327 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
CPS1P31327 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
CPS1P31327 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CPS1P31327 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CPS1P31327 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CPS1P31327 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC6.47□□□□□ -1.37
CPS1P31327 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.46□□□□□ -1.37
CPS1P31327 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.37
CPS1P31327 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.46□□□□□ -1.37
CPS1P31327 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CPS1P31327 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.46□□□□□ -1.37
CPS1P31327 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
CPS1P31327 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
CPS1P31327 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC6.46□□□□□ -1.37
CPS1P31327 AC114814.2-201ENST00000419195 485 ntBASIC6.46□□□□□ -1.37
CPS1P31327 RGS17P1-201ENST00000423358 553 ntBASIC6.46□□□□□ -1.37
CPS1P31327 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC6.46□□□□□ -1.37
CPS1P31327 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC6.46□□□□□ -1.37
CPS1P31327 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC6.46□□□□□ -1.37
CPS1P31327 APOA2-207ENST00000470459 416 ntTSL 5 BASIC6.46□□□□□ -1.37
CPS1P31327 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC6.46□□□□□ -1.37
CPS1P31327 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.46□□□□□ -1.37
CPS1P31327 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.46□□□□□ -1.37
CPS1P31327 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.37
CPS1P31327 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CPS1P31327 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CPS1P31327 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CPS1P31327 MAPK10-372ENST00000641954 3413 ntBASIC6.46□□□□□ -1.38
CPS1P31327 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
CPS1P31327 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC6.46□□□□□ -1.38
CPS1P31327 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC6.46□□□□□ -1.38
CPS1P31327 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CPS1P31327 AL034370.1-201ENST00000397254 1590 ntBASIC6.46□□□□□ -1.38
CPS1P31327 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
CPS1P31327 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
CPS1P31327 AL161909.1-201ENST00000397390 712 ntBASIC6.45□□□□□ -1.38
CPS1P31327 AC092647.1-201ENST00000420654 287 ntBASIC6.45□□□□□ -1.38
CPS1P31327 E2F6P2-201ENST00000420708 748 ntBASIC6.45□□□□□ -1.38
CPS1P31327 RPL7P15-201ENST00000461190 712 ntBASIC6.45□□□□□ -1.38
CPS1P31327 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.45□□□□□ -1.38
CPS1P31327 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CPS1P31327 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.45□□□□□ -1.38
CPS1P31327 AC092451.3-201ENST00000625067 1343 ntBASIC6.45□□□□□ -1.38
CPS1P31327 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CPS1P31327 AC018628.1-201ENST00000624147 3819 ntBASIC6.45□□□□□ -1.38
CPS1P31327 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
CPS1P31327 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC6.45□□□□□ -1.38
CPS1P31327 AC108467.2-201ENST00000617640 1597 ntBASIC6.45□□□□□ -1.38
CPS1P31327 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CPS1P31327 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CPS1P31327 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CPS1P31327 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CPS1P31327 MIR634-201ENST00000385208 97 ntBASIC6.45□□□□□ -1.38
CPS1P31327 RPL21P65-201ENST00000406094 466 ntBASIC6.45□□□□□ -1.38
CPS1P31327 RPL7P33-201ENST00000444159 742 ntBASIC6.45□□□□□ -1.38
CPS1P31327 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC6.45□□□□□ -1.38
CPS1P31327 RPL5P32-201ENST00000454085 879 ntBASIC6.45□□□□□ -1.38
CPS1P31327 RPL7P49-201ENST00000471402 708 ntBASIC6.45□□□□□ -1.38
CPS1P31327 PARP4P3-201ENST00000510265 317 ntBASIC6.45□□□□□ -1.38
CPS1P31327 AC005868.1-201ENST00000536421 331 ntBASIC6.45□□□□□ -1.38
CPS1P31327 AC006349.1-201ENST00000555526 235 ntBASIC6.45□□□□□ -1.38
CPS1P31327 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC6.45□□□□□ -1.38
CPS1P31327 AC113403.1-201ENST00000604910 193 ntBASIC6.45□□□□□ -1.38
CPS1P31327 SNORA51-201ENST00000606420 132 ntBASIC6.45□□□□□ -1.38
CPS1P31327 CR392039.5-201ENST00000623201 510 ntBASIC6.45□□□□□ -1.38
CPS1P31327 AC009120.7-201ENST00000623452 780 ntBASIC6.45□□□□□ -1.38
CPS1P31327 AC112484.5-201ENST00000624189 228 ntBASIC6.45□□□□□ -1.38
CPS1P31327 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CPS1P31327 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CPS1P31327 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.44□□□□□ -1.38
CPS1P31327 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CPS1P31327 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CPS1P31327 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CPS1P31327 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms