Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PTPREP23469 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
PTPREP23469 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PTPREP23469 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PTPREP23469 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PTPREP23469 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC8.31□□□□□ -1.08
PTPREP23469 ENO1P4-201ENST00000416471 1785 ntBASIC8.31□□□□□ -1.08
PTPREP23469 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
PTPREP23469 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PTPREP23469 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
PTPREP23469 RNU4-31P-201ENST00000384211 141 ntBASIC8.31□□□□□ -1.08
PTPREP23469 AL136116.1-201ENST00000403591 381 ntBASIC8.31□□□□□ -1.08
PTPREP23469 AC234782.4-201ENST00000417646 1048 ntBASIC8.31□□□□□ -1.08
PTPREP23469 RPL24P2-201ENST00000421023 475 ntBASIC8.31□□□□□ -1.08
PTPREP23469 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC8.31□□□□□ -1.08
PTPREP23469 AC006335.2-201ENST00000437993 330 ntBASIC8.31□□□□□ -1.08
PTPREP23469 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC8.31□□□□□ -1.08
PTPREP23469 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC8.31□□□□□ -1.08
PTPREP23469 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC8.31□□□□□ -1.08
PTPREP23469 RPL26P30-201ENST00000453533 435 ntBASIC8.31□□□□□ -1.08
PTPREP23469 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PTPREP23469 AC078785.3-201ENST00000476607 425 ntBASIC8.31□□□□□ -1.08
PTPREP23469 AC017015.1-201ENST00000477387 286 ntBASIC8.31□□□□□ -1.08
PTPREP23469 RPL29P23-201ENST00000486188 442 ntBASIC8.31□□□□□ -1.08
PTPREP23469 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC8.31□□□□□ -1.08
PTPREP23469 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC8.31□□□□□ -1.08
PTPREP23469 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC8.31□□□□□ -1.08
PTPREP23469 Vault.3-201ENST00000516676 95 ntBASIC8.31□□□□□ -1.08
PTPREP23469 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC8.31□□□□□ -1.08
PTPREP23469 SUB1P1-201ENST00000524415 382 ntBASIC8.31□□□□□ -1.08
PTPREP23469 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PTPREP23469 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PTPREP23469 NMNAT1P1-201ENST00000554095 876 ntBASIC8.31□□□□□ -1.08
PTPREP23469 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC8.31□□□□□ -1.08
PTPREP23469 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC8.31□□□□□ -1.08
PTPREP23469 AP001180.3-201ENST00000582221 145 ntBASIC8.31□□□□□ -1.08
PTPREP23469 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC8.31□□□□□ -1.08
PTPREP23469 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC8.31□□□□□ -1.08
PTPREP23469 TPMTP1-201ENST00000592307 737 ntBASIC8.31□□□□□ -1.08
PTPREP23469 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC8.31□□□□□ -1.08
PTPREP23469 AC015819.1-201ENST00000613588 663 ntBASIC8.31□□□□□ -1.08
PTPREP23469 AC231657.1-201ENST00000624313 397 ntBASIC8.31□□□□□ -1.08
PTPREP23469 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC8.31□□□□□ -1.08
PTPREP23469 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC8.31□□□□□ -1.08
PTPREP23469 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC8.31□□□□□ -1.08
PTPREP23469 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
PTPREP23469 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC8.31□□□□□ -1.08
PTPREP23469 AC079178.2-201ENST00000439323 1624 ntBASIC8.31□□□□□ -1.08
PTPREP23469 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC8.31□□□□□ -1.08
PTPREP23469 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC8.31□□□□□ -1.08
PTPREP23469 HYDIN2-203ENST00000614586 13885 ntBASIC8.31□□□□□ -1.08
PTPREP23469 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PTPREP23469 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PTPREP23469 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PTPREP23469 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC8.31□□□□□ -1.08
PTPREP23469 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PTPREP23469 NRK-204ENST00000540278 1687 ntTSL 2 BASIC8.3□□□□□ -1.08
PTPREP23469 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PTPREP23469 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC8.3□□□□□ -1.08
PTPREP23469 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
PTPREP23469 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC8.3□□□□□ -1.08
PTPREP23469 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PTPREP23469 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
PTPREP23469 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC8.3□□□□□ -1.08
PTPREP23469 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC8.3□□□□□ -1.08
PTPREP23469 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
PTPREP23469 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC8.3□□□□□ -1.08
PTPREP23469 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC8.3□□□□□ -1.08
PTPREP23469 RNU6-619P-201ENST00000365146 108 ntBASIC8.3□□□□□ -1.08
PTPREP23469 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PTPREP23469 Y_RNA.489-201ENST00000384410 101 ntBASIC8.3□□□□□ -1.08
PTPREP23469 Y_RNA.574-201ENST00000384766 95 ntBASIC8.3□□□□□ -1.08
PTPREP23469 RNU6-316P-201ENST00000391027 107 ntBASIC8.3□□□□□ -1.08
PTPREP23469 LDHAP5-201ENST00000394996 622 ntBASIC8.3□□□□□ -1.08
PTPREP23469 MRPL42P3-201ENST00000401492 326 ntBASIC8.3□□□□□ -1.08
PTPREP23469 AL390316.1-201ENST00000406279 553 ntBASIC8.3□□□□□ -1.08
PTPREP23469 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
PTPREP23469 RNA5SP280-201ENST00000411230 115 ntBASIC8.3□□□□□ -1.08
PTPREP23469 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC8.3□□□□□ -1.08
PTPREP23469 AL450992.3-201ENST00000413192 568 ntBASIC8.3□□□□□ -1.08
PTPREP23469 OR51A3P-201ENST00000413596 924 ntBASIC8.3□□□□□ -1.08
PTPREP23469 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC8.3□□□□□ -1.08
PTPREP23469 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC8.3□□□□□ -1.08
PTPREP23469 FGF12-202ENST00000430714 603 ntTSL 2 BASIC8.3□□□□□ -1.08
PTPREP23469 AC104698.1-201ENST00000435671 276 ntBASIC8.3□□□□□ -1.08
PTPREP23469 LSM1P1-201ENST00000438629 273 ntBASIC8.3□□□□□ -1.08
PTPREP23469 DEFA11P-201ENST00000446470 261 ntBASIC8.3□□□□□ -1.08
PTPREP23469 HMGB3P22-202ENST00000451823 572 ntBASIC8.3□□□□□ -1.08
PTPREP23469 AC007547.1-201ENST00000462177 490 ntBASIC8.3□□□□□ -1.08
PTPREP23469 AC044810.1-201ENST00000480271 711 ntBASIC8.3□□□□□ -1.08
PTPREP23469 MTCO1P29-201ENST00000496868 288 ntBASIC8.3□□□□□ -1.08
PTPREP23469 RNU6-1261P-201ENST00000517194 104 ntBASIC8.3□□□□□ -1.08
PTPREP23469 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PTPREP23469 IGLVI-42-201ENST00000522485 381 ntBASIC8.3□□□□□ -1.08
PTPREP23469 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC8.3□□□□□ -1.08
PTPREP23469 AP000676.2-201ENST00000529711 301 ntBASIC8.3□□□□□ -1.08
PTPREP23469 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC8.3□□□□□ -1.08
PTPREP23469 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC8.3□□□□□ -1.08
PTPREP23469 AC010287.1-201ENST00000566916 357 ntBASIC8.3□□□□□ -1.08
PTPREP23469 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms