Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC107918.3-201ENST00000533272 382 ntBASIC4.18□□□□□ -1.74
USF1P22415 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
USF1P22415 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.18□□□□□ -1.74
USF1P22415 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.18□□□□□ -1.74
USF1P22415 TVP23CP2-201ENST00000571473 623 ntBASIC4.18□□□□□ -1.74
USF1P22415 AL137072.1-201ENST00000603444 466 ntBASIC4.18□□□□□ -1.74
USF1P22415 AC008745.1-201ENST00000604064 271 ntBASIC4.18□□□□□ -1.74
USF1P22415 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.18□□□□□ -1.74
USF1P22415 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.18□□□□□ -1.74
USF1P22415 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.18□□□□□ -1.74
USF1P22415 AC073869.10-201ENST00000642016 354 ntBASIC4.18□□□□□ -1.74
USF1P22415 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USF1P22415 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USF1P22415 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
USF1P22415 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USF1P22415 AC026951.1-201ENST00000559530 2459 ntBASIC4.18□□□□□ -1.74
USF1P22415 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USF1P22415 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
USF1P22415 AL034370.1-201ENST00000397254 1590 ntBASIC4.18□□□□□ -1.74
USF1P22415 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.18□□□□□ -1.74
USF1P22415 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USF1P22415 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
USF1P22415 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USF1P22415 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
USF1P22415 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.17□□□□□ -1.74
USF1P22415 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
USF1P22415 OR10AB1P-202ENST00000641219 1686 ntBASIC4.17□□□□□ -1.74
USF1P22415 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USF1P22415 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USF1P22415 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
USF1P22415 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
USF1P22415 RNA5SP505-201ENST00000364748 108 ntBASIC4.17□□□□□ -1.74
USF1P22415 SNORA62-201ENST00000365493 153 ntBASIC4.17□□□□□ -1.74
USF1P22415 SNORA2.3-201ENST00000383920 135 ntBASIC4.17□□□□□ -1.74
USF1P22415 FABP12P1-201ENST00000401911 322 ntBASIC4.17□□□□□ -1.74
USF1P22415 RPL10P10-201ENST00000403509 664 ntBASIC4.17□□□□□ -1.74
USF1P22415 AL136116.2-201ENST00000404020 785 ntBASIC4.17□□□□□ -1.74
USF1P22415 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.17□□□□□ -1.74
USF1P22415 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.17□□□□□ -1.74
USF1P22415 AC092570.3-201ENST00000420113 693 ntBASIC4.17□□□□□ -1.74
USF1P22415 AC009480.2-201ENST00000422916 432 ntBASIC4.17□□□□□ -1.74
USF1P22415 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.17□□□□□ -1.74
USF1P22415 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.17□□□□□ -1.74
USF1P22415 RPL34P6-201ENST00000432390 345 ntBASIC4.17□□□□□ -1.74
USF1P22415 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.17□□□□□ -1.74
USF1P22415 TCEA1P1-201ENST00000449716 880 ntBASIC4.17□□□□□ -1.74
USF1P22415 NPM1P39-201ENST00000449818 867 ntBASIC4.17□□□□□ -1.74
USF1P22415 RPS6P2-201ENST00000454208 705 ntBASIC4.17□□□□□ -1.74
USF1P22415 AC011005.3-201ENST00000491624 395 ntBASIC4.17□□□□□ -1.74
USF1P22415 MRPS33P2-201ENST00000507850 322 ntBASIC4.17□□□□□ -1.74
USF1P22415 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.17□□□□□ -1.74
USF1P22415 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.17□□□□□ -1.74
USF1P22415 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.17□□□□□ -1.74
USF1P22415 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.17□□□□□ -1.74
USF1P22415 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.17□□□□□ -1.74
USF1P22415 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.17□□□□□ -1.74
USF1P22415 AC022882.1-201ENST00000532142 501 ntBASIC4.17□□□□□ -1.74
USF1P22415 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
USF1P22415 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.17□□□□□ -1.74
USF1P22415 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.17□□□□□ -1.74
USF1P22415 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.17□□□□□ -1.74
USF1P22415 AL592494.3-201ENST00000609485 464 ntBASIC4.17□□□□□ -1.74
USF1P22415 AC019193.2-201ENST00000610012 634 ntBASIC4.17□□□□□ -1.74
USF1P22415 AC015922.4-201ENST00000612568 690 ntBASIC4.17□□□□□ -1.74
USF1P22415 BX005214.3-202ENST00000619809 325 ntBASIC4.17□□□□□ -1.74
USF1P22415 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.17□□□□□ -1.74
USF1P22415 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.17□□□□□ -1.74
USF1P22415 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USF1P22415 AC011447.7-201ENST00000624228 1590 ntBASIC4.17□□□□□ -1.74
USF1P22415 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
USF1P22415 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
USF1P22415 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USF1P22415 AC100778.3-201ENST00000580060 1750 ntBASIC4.17□□□□□ -1.74
USF1P22415 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
USF1P22415 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
USF1P22415 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USF1P22415 HSPA8P17-201ENST00000427029 1382 ntBASIC4.16□□□□□ -1.74
USF1P22415 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USF1P22415 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.16□□□□□ -1.74
USF1P22415 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.16□□□□□ -1.74
USF1P22415 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
USF1P22415 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
USF1P22415 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.16□□□□□ -1.74
USF1P22415 AL356317.1-201ENST00000396110 1436 ntBASIC4.16□□□□□ -1.74
USF1P22415 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
USF1P22415 RN7SKP224-201ENST00000364140 325 ntBASIC4.16□□□□□ -1.74
USF1P22415 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
USF1P22415 AL035079.1-201ENST00000405210 287 ntBASIC4.16□□□□□ -1.74
USF1P22415 RCC2P2-201ENST00000422174 918 ntBASIC4.16□□□□□ -1.74
USF1P22415 AC104333.2-201ENST00000422630 192 ntBASIC4.16□□□□□ -1.74
USF1P22415 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.16□□□□□ -1.74
USF1P22415 COX6CP13-201ENST00000428703 226 ntBASIC4.16□□□□□ -1.74
USF1P22415 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.16□□□□□ -1.74
USF1P22415 BX323845.1-201ENST00000432417 179 ntBASIC4.16□□□□□ -1.74
USF1P22415 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.16□□□□□ -1.74
USF1P22415 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.16□□□□□ -1.74
USF1P22415 AC004980.3-201ENST00000447046 365 ntBASIC4.16□□□□□ -1.74
USF1P22415 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.16□□□□□ -1.74
USF1P22415 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.16□□□□□ -1.74
USF1P22415 RAB28P3-201ENST00000448325 597 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms