Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 AC013442.1-201ENST00000397347 228 ntBASIC5.03□□□□□ -1.6
HLA-DPA1P20036 AL078599.1-201ENST00000402075 293 ntBASIC5.03□□□□□ -1.6
HLA-DPA1P20036 RPS27AP11-201ENST00000402798 447 ntBASIC5.03□□□□□ -1.6
HLA-DPA1P20036 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.03□□□□□ -1.6
HLA-DPA1P20036 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 AC019050.1-201ENST00000418508 492 ntBASIC5.03□□□□□ -1.6
HLA-DPA1P20036 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 AC073464.3-201ENST00000422564 712 ntBASIC5.03□□□□□ -1.6
HLA-DPA1P20036 RPL12P34-201ENST00000424532 479 ntBASIC5.03□□□□□ -1.6
HLA-DPA1P20036 RPL12P28-201ENST00000430852 489 ntBASIC5.03□□□□□ -1.6
HLA-DPA1P20036 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 AC114878.1-201ENST00000441166 358 ntBASIC5.03□□□□□ -1.6
HLA-DPA1P20036 CEACAMP7-201ENST00000444105 496 ntBASIC5.03□□□□□ -1.6
HLA-DPA1P20036 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 RPL7P48-201ENST00000461513 746 ntBASIC5.03□□□□□ -1.6
HLA-DPA1P20036 RPL7AP6-201ENST00000477943 801 ntBASIC5.03□□□□□ -1.6
HLA-DPA1P20036 SUMO1P1-201ENST00000497904 306 ntBASIC5.03□□□□□ -1.6
HLA-DPA1P20036 AC004980.4-201ENST00000513375 203 ntBASIC5.03□□□□□ -1.6
HLA-DPA1P20036 RN7SKP66-201ENST00000516681 231 ntBASIC5.03□□□□□ -1.6
HLA-DPA1P20036 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 AC087763.1-201ENST00000603391 286 ntBASIC5.03□□□□□ -1.6
HLA-DPA1P20036 AC005377.1-201ENST00000605126 456 ntBASIC5.03□□□□□ -1.6
HLA-DPA1P20036 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 AC093799.2-201ENST00000610062 578 ntBASIC5.03□□□□□ -1.6
HLA-DPA1P20036 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 MIR7155-201ENST00000615925 56 ntBASIC5.03□□□□□ -1.6
HLA-DPA1P20036 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 AL034370.1-201ENST00000397254 1590 ntBASIC5.03□□□□□ -1.6
HLA-DPA1P20036 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DPA1P20036 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.03□□□□□ -1.61
HLA-DPA1P20036 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 RNA5SP455-201ENST00000365190 119 ntBASIC5.02□□□□□ -1.61
HLA-DPA1P20036 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 GEMIN8P3-201ENST00000445417 720 ntBASIC5.02□□□□□ -1.61
HLA-DPA1P20036 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 AC073850.1-201ENST00000449243 255 ntBASIC5.02□□□□□ -1.61
HLA-DPA1P20036 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 AC092691.2-201ENST00000461787 803 ntBASIC5.02□□□□□ -1.61
HLA-DPA1P20036 RPL23AP12-201ENST00000467573 473 ntBASIC5.02□□□□□ -1.61
HLA-DPA1P20036 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 RPL32P9-201ENST00000487963 407 ntBASIC5.02□□□□□ -1.61
HLA-DPA1P20036 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 RN7SL808P-201ENST00000496066 299 ntBASIC5.02□□□□□ -1.61
HLA-DPA1P20036 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 RNU6-1004P-201ENST00000516584 111 ntBASIC5.02□□□□□ -1.61
HLA-DPA1P20036 AC013701.1-201ENST00000522657 465 ntBASIC5.02□□□□□ -1.61
HLA-DPA1P20036 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 TVP23CP2-201ENST00000571473 623 ntBASIC5.02□□□□□ -1.61
HLA-DPA1P20036 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 MIR4691-201ENST00000583764 85 ntBASIC5.02□□□□□ -1.61
HLA-DPA1P20036 AC104687.2-201ENST00000604442 342 ntBASIC5.02□□□□□ -1.61
HLA-DPA1P20036 AC087783.2-201ENST00000605070 562 ntBASIC5.02□□□□□ -1.61
HLA-DPA1P20036 AL445222.1-201ENST00000607259 628 ntBASIC5.02□□□□□ -1.61
HLA-DPA1P20036 BX323046.1-201ENST00000610145 535 ntBASIC5.02□□□□□ -1.61
HLA-DPA1P20036 AL049794.2-201ENST00000616301 365 ntBASIC5.02□□□□□ -1.61
HLA-DPA1P20036 AC139769.3-201ENST00000618383 175 ntBASIC5.02□□□□□ -1.61
HLA-DPA1P20036 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 DDX18P3-201ENST00000404856 2007 ntBASIC5.02□□□□□ -1.61
HLA-DPA1P20036 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 CCT8P1-201ENST00000413611 1657 ntBASIC5.02□□□□□ -1.61
HLA-DPA1P20036 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DPA1P20036 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DPA1P20036 HSPA8P18-201ENST00000439846 1928 ntBASIC5.01□□□□□ -1.61
HLA-DPA1P20036 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms