Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC104785.1-201ENST00000603220 588 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 AC010424.2-201ENST00000607594 443 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 AC007497.1-201ENST00000610421 561 ntBASIC4.78□□□□□ -1.64
XRCC1P18887 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.78□□□□□ -1.64
XRCC1P18887 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
XRCC1P18887 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.78□□□□□ -1.64
XRCC1P18887 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.78□□□□□ -1.64
XRCC1P18887 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.78□□□□□ -1.64
XRCC1P18887 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.78□□□□□ -1.64
XRCC1P18887 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.77□□□□□ -1.65
XRCC1P18887 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
XRCC1P18887 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
XRCC1P18887 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
XRCC1P18887 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
XRCC1P18887 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
XRCC1P18887 AC107068.1-201ENST00000563286 4218 ntBASIC4.77□□□□□ -1.65
XRCC1P18887 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.77□□□□□ -1.65
XRCC1P18887 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
XRCC1P18887 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
XRCC1P18887 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
XRCC1P18887 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
XRCC1P18887 RNA5SP345-201ENST00000410646 108 ntBASIC4.77□□□□□ -1.65
XRCC1P18887 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.77□□□□□ -1.65
XRCC1P18887 AC114755.2-201ENST00000413520 361 ntBASIC4.77□□□□□ -1.65
XRCC1P18887 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.77□□□□□ -1.65
XRCC1P18887 AC106901.1-201ENST00000425086 698 ntBASIC4.77□□□□□ -1.65
XRCC1P18887 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.77□□□□□ -1.65
XRCC1P18887 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.77□□□□□ -1.65
XRCC1P18887 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
XRCC1P18887 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.77□□□□□ -1.65
XRCC1P18887 RAD1P2-201ENST00000446414 663 ntBASIC4.77□□□□□ -1.65
XRCC1P18887 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.77□□□□□ -1.65
XRCC1P18887 MTND6P32-201ENST00000457611 483 ntBASIC4.77□□□□□ -1.65
XRCC1P18887 RPS29P22-201ENST00000472363 168 ntBASIC4.77□□□□□ -1.65
XRCC1P18887 MTND3P6-201ENST00000485242 339 ntBASIC4.77□□□□□ -1.65
XRCC1P18887 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.77□□□□□ -1.65
XRCC1P18887 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
XRCC1P18887 ARL4AP1-201ENST00000503220 705 ntBASIC4.77□□□□□ -1.65
XRCC1P18887 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.77□□□□□ -1.65
XRCC1P18887 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
XRCC1P18887 RNA5SP392-201ENST00000516905 112 ntBASIC4.77□□□□□ -1.65
XRCC1P18887 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.77□□□□□ -1.65
XRCC1P18887 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
XRCC1P18887 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.77□□□□□ -1.65
XRCC1P18887 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.77□□□□□ -1.65
XRCC1P18887 AC011453.2-201ENST00000603737 729 ntBASIC4.77□□□□□ -1.65
XRCC1P18887 AC104687.2-201ENST00000604442 342 ntBASIC4.77□□□□□ -1.65
XRCC1P18887 AL353600.1-201ENST00000608148 251 ntBASIC4.77□□□□□ -1.65
XRCC1P18887 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.77□□□□□ -1.65
XRCC1P18887 AC097505.1-201ENST00000610199 565 ntBASIC4.77□□□□□ -1.65
XRCC1P18887 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.77□□□□□ -1.65
XRCC1P18887 AL391597.1-201ENST00000618707 694 ntBASIC4.77□□□□□ -1.65
XRCC1P18887 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.77□□□□□ -1.65
XRCC1P18887 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.77□□□□□ -1.65
XRCC1P18887 AC009643.2-201ENST00000603543 1448 ntBASIC4.77□□□□□ -1.65
XRCC1P18887 RBPJP2-201ENST00000618187 1444 ntBASIC4.77□□□□□ -1.65
XRCC1P18887 AC107021.2-201ENST00000567714 2095 ntBASIC4.77□□□□□ -1.65
XRCC1P18887 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.77□□□□□ -1.65
XRCC1P18887 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
XRCC1P18887 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
XRCC1P18887 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
XRCC1P18887 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
XRCC1P18887 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
XRCC1P18887 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.76□□□□□ -1.65
XRCC1P18887 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.76□□□□□ -1.65
XRCC1P18887 AC012618.3-205ENST00000637896 1496 ntBASIC4.76□□□□□ -1.65
XRCC1P18887 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
XRCC1P18887 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
XRCC1P18887 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.76□□□□□ -1.65
XRCC1P18887 RNU6-386P-201ENST00000362650 107 ntBASIC4.76□□□□□ -1.65
XRCC1P18887 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
XRCC1P18887 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
XRCC1P18887 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
XRCC1P18887 AJ239321.1-201ENST00000424255 564 ntBASIC4.76□□□□□ -1.65
XRCC1P18887 NMNAT1P2-201ENST00000435192 860 ntBASIC4.76□□□□□ -1.65
XRCC1P18887 TMX2P1-201ENST00000436507 708 ntBASIC4.76□□□□□ -1.65
XRCC1P18887 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.76□□□□□ -1.65
XRCC1P18887 OR1H1P-201ENST00000448731 937 ntBASIC4.76□□□□□ -1.65
XRCC1P18887 AC234781.3-201ENST00000452540 973 ntBASIC4.76□□□□□ -1.65
XRCC1P18887 C1DP3-201ENST00000455013 423 ntBASIC4.76□□□□□ -1.65
XRCC1P18887 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
XRCC1P18887 RPL31P53-201ENST00000457065 348 ntBASIC4.76□□□□□ -1.65
XRCC1P18887 RN7SL517P-201ENST00000462240 305 ntBASIC4.76□□□□□ -1.65
XRCC1P18887 AC022336.1-201ENST00000475510 337 ntBASIC4.76□□□□□ -1.65
XRCC1P18887 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.76□□□□□ -1.65
XRCC1P18887 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
XRCC1P18887 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
XRCC1P18887 OR7H2P-201ENST00000513483 306 ntBASIC4.76□□□□□ -1.65
XRCC1P18887 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.76□□□□□ -1.65
XRCC1P18887 RNU6-319P-201ENST00000516025 108 ntBASIC4.76□□□□□ -1.65
XRCC1P18887 Y_RNA.719-201ENST00000517156 106 ntBASIC4.76□□□□□ -1.65
XRCC1P18887 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.76□□□□□ -1.65
XRCC1P18887 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.76□□□□□ -1.65
XRCC1P18887 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.76□□□□□ -1.65
XRCC1P18887 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.76□□□□□ -1.65
XRCC1P18887 AC091042.1-201ENST00000579213 173 ntBASIC4.76□□□□□ -1.65
XRCC1P18887 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.76□□□□□ -1.65
XRCC1P18887 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.76□□□□□ -1.65
XRCC1P18887 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.76□□□□□ -1.65
XRCC1P18887 GMCL1P2-201ENST00000605230 823 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms