Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.18□□□□□ -1.58
PDGFRAP16234 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFRAP16234 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.18□□□□□ -1.58
PDGFRAP16234 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.18□□□□□ -1.58
PDGFRAP16234 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.18□□□□□ -1.58
PDGFRAP16234 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PDGFRAP16234 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFRAP16234 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
PDGFRAP16234 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFRAP16234 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.18□□□□□ -1.58
PDGFRAP16234 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
PDGFRAP16234 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFRAP16234 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFRAP16234 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFRAP16234 RN7SKP95-201ENST00000362860 303 ntBASIC5.17□□□□□ -1.58
PDGFRAP16234 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFRAP16234 RNU6-40P-201ENST00000384254 107 ntBASIC5.17□□□□□ -1.58
PDGFRAP16234 RNU6-31P-201ENST00000384388 108 ntBASIC5.17□□□□□ -1.58
PDGFRAP16234 AL021331.1-201ENST00000402817 582 ntBASIC5.17□□□□□ -1.58
PDGFRAP16234 AL034374.1-201ENST00000406329 351 ntBASIC5.17□□□□□ -1.58
PDGFRAP16234 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.17□□□□□ -1.58
PDGFRAP16234 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.17□□□□□ -1.58
PDGFRAP16234 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.17□□□□□ -1.58
PDGFRAP16234 OR13Z1P-201ENST00000416141 834 ntBASIC5.17□□□□□ -1.58
PDGFRAP16234 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.17□□□□□ -1.58
PDGFRAP16234 AC022022.1-201ENST00000430304 178 ntBASIC5.17□□□□□ -1.58
PDGFRAP16234 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.17□□□□□ -1.58
PDGFRAP16234 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.17□□□□□ -1.58
PDGFRAP16234 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.17□□□□□ -1.58
PDGFRAP16234 BTF3P6-201ENST00000448054 499 ntBASIC5.17□□□□□ -1.58
PDGFRAP16234 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.17□□□□□ -1.58
PDGFRAP16234 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.17□□□□□ -1.58
PDGFRAP16234 RPL35AP28-201ENST00000459730 331 ntBASIC5.17□□□□□ -1.58
PDGFRAP16234 AC023424.1-201ENST00000496058 459 ntBASIC5.17□□□□□ -1.58
PDGFRAP16234 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.17□□□□□ -1.58
PDGFRAP16234 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.17□□□□□ -1.58
PDGFRAP16234 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.17□□□□□ -1.58
PDGFRAP16234 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.17□□□□□ -1.58
PDGFRAP16234 AP001922.4-201ENST00000526967 290 ntBASIC5.17□□□□□ -1.58
PDGFRAP16234 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.17□□□□□ -1.58
PDGFRAP16234 AC005868.1-201ENST00000536421 331 ntBASIC5.17□□□□□ -1.58
PDGFRAP16234 AC004948.1-201ENST00000609858 672 ntBASIC5.17□□□□□ -1.58
PDGFRAP16234 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.17□□□□□ -1.58
PDGFRAP16234 AL445528.2-201ENST00000620582 470 ntBASIC5.17□□□□□ -1.58
PDGFRAP16234 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.17□□□□□ -1.58
PDGFRAP16234 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.17□□□□□ -1.58
PDGFRAP16234 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFRAP16234 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.16□□□□□ -1.58
PDGFRAP16234 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PDGFRAP16234 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFRAP16234 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFRAP16234 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
PDGFRAP16234 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFRAP16234 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PDGFRAP16234 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PDGFRAP16234 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFRAP16234 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFRAP16234 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFRAP16234 NCSTNP1-201ENST00000406229 144 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 RANP4-201ENST00000413361 655 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 CHEK2P3-201ENST00000416118 248 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 AC009302.1-201ENST00000417147 390 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 OR5M12P-201ENST00000423388 929 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFRAP16234 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.16□□□□□ -1.58
PDGFRAP16234 TMX2P1-201ENST00000436507 708 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.16□□□□□ -1.58
PDGFRAP16234 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.16□□□□□ -1.58
PDGFRAP16234 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.16□□□□□ -1.58
PDGFRAP16234 PTMAP3-201ENST00000447474 330 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.16□□□□□ -1.58
PDGFRAP16234 HIGD1AP8-201ENST00000453927 274 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 GYG1P1-201ENST00000460864 698 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 RN7SL517P-201ENST00000462240 305 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 AP000942.1-201ENST00000463969 747 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 AC069304.1-201ENST00000491593 704 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 AC140172.1-201ENST00000502928 141 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 MRPS33P2-201ENST00000507850 322 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 snoU109.6-201ENST00000516831 118 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.16□□□□□ -1.58
PDGFRAP16234 AC026688.1-201ENST00000520639 1168 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 AP006245.2-201ENST00000522004 300 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.16□□□□□ -1.58
PDGFRAP16234 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.16□□□□□ -1.58
PDGFRAP16234 AC087783.2-201ENST00000605070 562 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.16□□□□□ -1.58
PDGFRAP16234 Mico1.1-201ENST00000611698 204 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFRAP16234 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFRAP16234 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.16□□□□□ -1.58
PDGFRAP16234 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
PDGFRAP16234 AC021242.1-201ENST00000507315 2035 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 AC104118.1-201ENST00000607625 1589 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFRAP16234 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFRAP16234 AC104260.2-201ENST00000623551 3497 ntBASIC5.16□□□□□ -1.58
PDGFRAP16234 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
PDGFRAP16234 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
PDGFRAP16234 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.15□□□□□ -1.58
PDGFRAP16234 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms