Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.95□□□□□ -1.46
COL6A2P12110 RPS7P8-201ENST00000418311 581 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 FAM183DP-201ENST00000421987 399 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 RPL12P12-201ENST00000424633 501 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.95□□□□□ -1.46
COL6A2P12110 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
COL6A2P12110 RPEP4-201ENST00000437636 602 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 TPTE2P6-202ENST00000445572 1007 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 FAR2P1-206ENST00000449736 709 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 AL591363.1-201ENST00000450091 483 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 OR52E3P-201ENST00000452083 936 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 PDCL3P4-201ENST00000489621 720 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL6A2P12110 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL6A2P12110 AC092349.1-201ENST00000504903 310 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.95□□□□□ -1.46
COL6A2P12110 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.95□□□□□ -1.46
COL6A2P12110 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.95□□□□□ -1.46
COL6A2P12110 AL121594.2-201ENST00000541658 472 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 AC008083.2-201ENST00000546707 476 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.95□□□□□ -1.46
COL6A2P12110 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.95□□□□□ -1.46
COL6A2P12110 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL6A2P12110 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.95□□□□□ -1.46
COL6A2P12110 ROCK1P1-201ENST00000573767 549 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.95□□□□□ -1.46
COL6A2P12110 MIR548Y-201ENST00000582739 110 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 AC060780.2-201ENST00000589047 198 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.95□□□□□ -1.46
COL6A2P12110 AC006270.3-201ENST00000605967 1036 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.95□□□□□ -1.46
COL6A2P12110 AL135786.2-201ENST00000608422 615 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 MIR6889-201ENST00000613185 59 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 AL136981.2-201ENST00000617319 734 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.95□□□□□ -1.46
COL6A2P12110 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
COL6A2P12110 AC007996.1-201ENST00000620414 2821 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.95□□□□□ -1.46
COL6A2P12110 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL6A2P12110 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.95□□□□□ -1.46
COL6A2P12110 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.95□□□□□ -1.46
COL6A2P12110 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.95□□□□□ -1.46
COL6A2P12110 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.95□□□□□ -1.46
COL6A2P12110 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
COL6A2P12110 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
COL6A2P12110 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.94□□□□□ -1.46
COL6A2P12110 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
COL6A2P12110 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.94□□□□□ -1.46
COL6A2P12110 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL6A2P12110 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
COL6A2P12110 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL6A2P12110 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
COL6A2P12110 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL6A2P12110 AC020656.2-201ENST00000613291 5309 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
COL6A2P12110 HMGB1P5-201ENST00000255320 642 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL6A2P12110 RPL11P4-201ENST00000332269 436 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 MIR133A2-201ENST00000347538 102 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC5.94□□□□□ -1.46
COL6A2P12110 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.94□□□□□ -1.46
COL6A2P12110 RNU6-1263P-201ENST00000384601 106 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
COL6A2P12110 SNORA11C-201ENST00000408532 129 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 AC099535.1-201ENST00000408928 371 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 Y_RNA.604-201ENST00000410574 102 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 RNU2-18P-201ENST00000411224 162 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 RPS15AP38-201ENST00000413110 372 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.94□□□□□ -1.46
COL6A2P12110 AL354868.1-201ENST00000417077 482 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.94□□□□□ -1.46
COL6A2P12110 GAPDHP49-201ENST00000421421 961 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 IPPKP1-201ENST00000422501 768 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 AL009174.1-201ENST00000426577 416 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.94□□□□□ -1.46
COL6A2P12110 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.94□□□□□ -1.46
COL6A2P12110 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.94□□□□□ -1.46
COL6A2P12110 MED14P1-201ENST00000430517 648 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 HMGB3P10-201ENST00000434734 572 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 MTND1P4-201ENST00000435196 415 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.94□□□□□ -1.46
COL6A2P12110 ZNF619P1-201ENST00000446539 752 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL6A2P12110 SEPT7P3-201ENST00000455017 621 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 AC104687.1-201ENST00000485829 412 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 AC083795.1-201ENST00000491760 320 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 SNRPCP11-201ENST00000492453 205 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 AC004069.2-201ENST00000505438 1114 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.94□□□□□ -1.46
COL6A2P12110 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.94□□□□□ -1.46
COL6A2P12110 RPL7L1P4-201ENST00000513004 707 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.94□□□□□ -1.46
COL6A2P12110 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.94□□□□□ -1.46
COL6A2P12110 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
COL6A2P12110 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.94□□□□□ -1.46
COL6A2P12110 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.94□□□□□ -1.46
COL6A2P12110 AC136777.2-201ENST00000522979 358 ntBASIC5.94□□□□□ -1.46
COL6A2P12110 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms