Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AL034418.1-201ENST00000448675 860 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 MTND5P20-201ENST00000448677 143 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 AC092824.1-201ENST00000483524 576 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 AC117522.1-201ENST00000509821 380 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 Y_RNA.702-201ENST00000516843 96 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 AC092747.2-201ENST00000545069 983 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 RAB11AP2-201ENST00000545905 639 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 MIR4505-201ENST00000582238 73 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 MIR4999-201ENST00000585029 91 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 AC006539.2-201ENST00000601729 572 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 FO393422.1-201ENST00000603908 708 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 AC063943.3-201ENST00000615562 356 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 MTND1P37-201ENST00000636562 264 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 CYP4Z2P-201ENST00000423332 1512 ntBASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CSB-PGBD3P0DP91 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 Z93929.1-201ENST00000418200 1475 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AC016716.1-201ENST00000265882 708 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AL672167.1-206ENST00000356293 943 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 RN7SKP128-201ENST00000364270 303 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 RNA5SP132-201ENST00000364725 118 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AL034374.1-201ENST00000406329 351 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 RN7SKP33-201ENST00000410942 340 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 OR51A5P-201ENST00000415429 942 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 PAICSP7-201ENST00000419829 962 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 PTP4A1P1-201ENST00000420539 515 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 VDAC1P2-201ENST00000423609 850 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 HMGB1P45-201ENST00000435986 653 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 RPS26P30-201ENST00000443431 335 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AC023271.1-201ENST00000445936 1090 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 TPMTP4-201ENST00000450749 678 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 RPL21P134-201ENST00000453468 483 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 UBDP1-202ENST00000457888 382 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 GAPDHP36-201ENST00000480688 918 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AC079382.1-201ENST00000493346 557 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AC008837.2-201ENST00000513076 418 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 RNA5SP400-201ENST00000517155 111 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AC025881.1-201ENST00000518851 512 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AC027026.1-201ENST00000532323 742 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AC079171.1-201ENST00000568788 914 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AC233702.7-202ENST00000582941 211 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 ABBA01006766.1-201ENST00000584728 294 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 C8orf59P2-201ENST00000603441 271 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AL391497.1-201ENST00000608671 547 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AL137067.2-201ENST00000621202 131 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 AC099654.14-201ENST00000638599 341 ntBASIC8.07□□□□□ -1.12
CSB-PGBD3P0DP91 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms