Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
TPM1P09493 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TPM1P09493 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TPM1P09493 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TPM1P09493 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TPM1P09493 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.13□□□□□ -1.59
TPM1P09493 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
TPM1P09493 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.13□□□□□ -1.59
TPM1P09493 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
TPM1P09493 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.13□□□□□ -1.59
TPM1P09493 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.13□□□□□ -1.59
TPM1P09493 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TPM1P09493 RN7SKP160-201ENST00000363804 340 ntBASIC5.13□□□□□ -1.59
TPM1P09493 AL590762.2-201ENST00000395798 571 ntBASIC5.13□□□□□ -1.59
TPM1P09493 AL512430.2-201ENST00000406786 339 ntBASIC5.13□□□□□ -1.59
TPM1P09493 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.13□□□□□ -1.59
TPM1P09493 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.13□□□□□ -1.59
TPM1P09493 AL590609.2-201ENST00000421430 368 ntBASIC5.13□□□□□ -1.59
TPM1P09493 AC234781.3-201ENST00000452540 973 ntBASIC5.13□□□□□ -1.59
TPM1P09493 RPL23AP56-201ENST00000460778 453 ntBASIC5.13□□□□□ -1.59
TPM1P09493 AP002371.1-201ENST00000463604 433 ntBASIC5.13□□□□□ -1.59
TPM1P09493 RPS18P6-201ENST00000476880 458 ntBASIC5.13□□□□□ -1.59
TPM1P09493 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.13□□□□□ -1.59
TPM1P09493 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.13□□□□□ -1.59
TPM1P09493 BUD31P1-201ENST00000521828 359 ntBASIC5.13□□□□□ -1.59
TPM1P09493 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.13□□□□□ -1.59
TPM1P09493 AC133555.2-201ENST00000550213 292 ntBASIC5.13□□□□□ -1.59
TPM1P09493 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TPM1P09493 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.13□□□□□ -1.59
TPM1P09493 MIR4691-201ENST00000583764 85 ntBASIC5.13□□□□□ -1.59
TPM1P09493 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.13□□□□□ -1.59
TPM1P09493 MEMO1P5-201ENST00000604810 406 ntBASIC5.13□□□□□ -1.59
TPM1P09493 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
TPM1P09493 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.13□□□□□ -1.59
TPM1P09493 AL049767.1-202ENST00000637826 242 ntBASIC5.13□□□□□ -1.59
TPM1P09493 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
TPM1P09493 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
TPM1P09493 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.13□□□□□ -1.59
TPM1P09493 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
TPM1P09493 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.13□□□□□ -1.59
TPM1P09493 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.13□□□□□ -1.59
TPM1P09493 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.13□□□□□ -1.59
TPM1P09493 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TPM1P09493 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TPM1P09493 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TPM1P09493 DDX18P3-201ENST00000404856 2007 ntBASIC5.13□□□□□ -1.59
TPM1P09493 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.13□□□□□ -1.59
TPM1P09493 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TPM1P09493 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TPM1P09493 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
TPM1P09493 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TPM1P09493 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
TPM1P09493 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TPM1P09493 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TPM1P09493 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TPM1P09493 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
TPM1P09493 RNU6-1331P-201ENST00000363658 106 ntBASIC5.12□□□□□ -1.59
TPM1P09493 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.12□□□□□ -1.59
TPM1P09493 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TPM1P09493 MIR1286-201ENST00000408112 78 ntBASIC5.12□□□□□ -1.59
TPM1P09493 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.12□□□□□ -1.59
TPM1P09493 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TPM1P09493 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.12□□□□□ -1.59
TPM1P09493 AC244033.1-201ENST00000426826 870 ntBASIC5.12□□□□□ -1.59
TPM1P09493 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TPM1P09493 RPL23AP25-201ENST00000430973 463 ntBASIC5.12□□□□□ -1.59
TPM1P09493 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TPM1P09493 PRPF38AP2-201ENST00000438179 851 ntBASIC5.12□□□□□ -1.59
TPM1P09493 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.12□□□□□ -1.59
TPM1P09493 AC022431.1-201ENST00000450941 438 ntBASIC5.12□□□□□ -1.59
TPM1P09493 AC090142.1-201ENST00000465776 462 ntBASIC5.12□□□□□ -1.59
TPM1P09493 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.12□□□□□ -1.59
TPM1P09493 AC140172.1-201ENST00000502928 141 ntBASIC5.12□□□□□ -1.59
TPM1P09493 AC090568.1-201ENST00000509499 856 ntBASIC5.12□□□□□ -1.59
TPM1P09493 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.12□□□□□ -1.59
TPM1P09493 AC090151.1-201ENST00000520784 730 ntBASIC5.12□□□□□ -1.59
TPM1P09493 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.12□□□□□ -1.59
TPM1P09493 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.12□□□□□ -1.59
TPM1P09493 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.12□□□□□ -1.59
TPM1P09493 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.12□□□□□ -1.59
TPM1P09493 AC209154.1-201ENST00000582156 337 ntBASIC5.12□□□□□ -1.59
TPM1P09493 OR1AB1P-201ENST00000585564 761 ntBASIC5.12□□□□□ -1.59
TPM1P09493 AC015982.1-201ENST00000608113 465 ntBASIC5.12□□□□□ -1.59
TPM1P09493 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.12□□□□□ -1.59
TPM1P09493 AP003072.5-201ENST00000623872 773 ntBASIC5.12□□□□□ -1.59
TPM1P09493 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TPM1P09493 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.12□□□□□ -1.59
TPM1P09493 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TPM1P09493 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.12□□□□□ -1.59
TPM1P09493 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.12□□□□□ -1.59
TPM1P09493 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TPM1P09493 AC093535.2-201ENST00000624769 2326 ntBASIC5.12□□□□□ -1.59
TPM1P09493 AL031119.1-201ENST00000404707 1879 ntBASIC5.11□□□□□ -1.59
TPM1P09493 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TPM1P09493 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TPM1P09493 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TPM1P09493 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
TPM1P09493 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TPM1P09493 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.11□□□□□ -1.59
TPM1P09493 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms